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AT1G62422.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J1NUeggNOG:ENOG410ZMJNEMBL:AC003113EMBL:AK221041EMBL:CP002684EnsemblPlants:AT1G62422EnsemblPlants:AT1G62422.1
entrez:5007832GeneID:5007832Gramene:AT1G62422.1hmmpanther:PTHR31903hmmpanther:PTHR31903:SF6HOGENOM:HOG000241111KEGG:ath:AT1G62422
OMA:NCGGEEAPhylomeDB:Q9MAV1PIR:T01453Proteomes:UP000006548RefSeq:NP_001077759.1TAIR:AT1G62422UniGene:At.71115
UniProt:Q9MAV1
Coordinates (TAIR10) chr1:-:23100419..23100985
Molecular Weight (calculated) 20883.90 Da
IEP (calculated) 9.24
GRAVY (calculated) -0.58
Length 188 amino acids
Sequence (TAIR10)
(BLAST)
001: MKKLCRKGTV HPSPPPAIKT DEQFLSLLPV AILSLVAALS VEDREVLAYL ISNSGDSNRI SRLKKNKEDN HHSPLFLCDC FSCYTSYWVR WDTSPRRQLI
101: HEIIDAYEDS LEMKKKKKDR RKRSGKASGR VNSIGTSRLS ELGSSSAEFA GGDSEKDGNC GGEEAEKEKG SVGKVMSFIG QRFLGVWG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)