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AT1G62400.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.769
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
high leaf temperature 1 (HT1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G58950.1); Has 132835 Blast hits to 130849 proteins in 5233 species: Archae - 136; Bacteria - 14325; Metazoa - 51137; Fungi - 12092; Plants - 33829; Viruses - 555; Other Eukaryotes - 20761 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G62400-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:KOG0192EMBL:AB221045EMBL:AC003113EMBL:CP002684
EnsemblPlants:AT1G62400EnsemblPlants:AT1G62400.1entrez:842538GeneID:842538Genevisible:Q2MHE4GO:GO:0004674GO:GO:0005524
Gramene:AT1G62400.1hmmpanther:PTHR23257hmmpanther:PTHR23257:SF475HOGENOM:HOG000233857InParanoid:Q2MHE4IntAct:Q2MHE4InterPro:IPR000719
InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009InterPro:IPR015783KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:ath:AT1G62400
PANTHER:PTHR23257:SF475PaxDb:Q2MHE4Pfam:PF07714Pfam:Q2MHE4Pfscan:PS50011PhylomeDB:Q2MHE4PIR:T01451
PRIDE:Q2MHE4PRINTS:PR00109PRO:PR:Q2MHE4PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q2MHE4Proteomes:UP000006548
RefSeq:NP_176430.1scanprosite:PS00108SMART:SM00220SMR:Q2MHE4STRING:3702.AT1G62400.1SUPFAM:SSF56112TAIR:AT1G62400
tair10-symbols:HT1UniGene:At.28069UniProt:Q2MHE4
Coordinates (TAIR10) chr1:+:23090243..23091529
Molecular Weight (calculated) 39191.50 Da
IEP (calculated) 9.00
GRAVY (calculated) -0.33
Length 345 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKKRFDSME SWSMILESEN VETWEASKGE REEWTADLSQ LFIGNKFASG AHSRIYRGIY KQRAVAVKMV RIPTHKEETR AKLEQQFKSE VALLSRLFHP
101: NIVQFIAACK KPPVYCIITE YMSQGNLRMY LNKKEPYSLS IETVLRLALD ISRGMEYLHS QGVIHRDLKS NNLLLNDEMR VKVADFGTSC LETQCREAKG
201: NMGTYRWMAP EMIKEKPYTR KVDVYSFGIV LWELTTALLP FQGMTPVQAA FAVAEKNERP PLPASCQPAL AHLIKRCWSE NPSKRPDFSN IVAVLEKYDE
301: CVKEGLPLTS HASLTKTKKA ILDHLKGCVT SISSPFSSSS VPVNA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)