AT1G61120.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 ASURE: cytosol What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : terpene synthase 04 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a geranyllinalool synthase that produces a precursor to TMTT, a volatile plant defense C16-homoterpene. GES transcript levels rise in response to alamethicin, a fungal peptide mixture that damages membranes. This transcriptional response is blocked in JA biosynthetic and JA signaling mutants, but GES transcript levels still rise in response to alamethicin in mutants with salicylic acid and ethylene biosynthetic and/or signaling defects. GES transcripts also accumulate in response to a larval infestation. This enzyme does not localize to the plastids, and it may be present in the cytosol or endoplasmic reticulum. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
terpene synthase 04 (TPS04); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT1G79460.1); Has 1879 Blast hits to 1869 proteins in 199 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 7; Plants - 1856; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:22523689..22528598 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 101901.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.54 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.35 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 877 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKSSYGSSSN DLHAFVNEIK GEIQLSNINL DPYSFVSPSA YDTAWLSMIE EDINVDDNEL KPMFQGCLDW IMCNQNAREG FWMNSTSYTT VADGRDEDGE 101: KDMCILTSTL ACVVALQKWN IGCFHLHKGT RYIERNTEMI IGKYINEEGS YPRWFAIKFT GILELAQKLG LHFVFSSRCI EMIKGMFYQR QEIIQREKLV 201: HDCNYKPLLA YLEVLPSKLY VTNQEDIIVK SLDSMDGSLF QSPSATASAF MLTRNTKCLA YLQNLVQKCP NGVPQKYPLN EDLIKLSMVN LIESTGLGEF 301: FGIEIEHVLE QVYSRYEEKD FERMPMSYLA DQLHKDSLAF RMLRMHGRDV SPRSFCWFLN DQETRNHLER NIDSFLLVIL SVYRATDLMF PGEHDLQEAR 401: EYTRNLLEKR RSIKEKMIMH ELSTPWIARL KHLDHRMWIE DKNSNVLSME KASFLRLHSS YSDKLTHLAA RNFEFQQAKY CRELEELTMW VKKWGLSDIG 501: FGREKTTYCY FATVTSLPYE YAIKFGKLAA KTAILITIAD DFFDEKGSFN DLEGLTKAVL RWEGEELKSY GNIIFRALDD IVRETANTCR THHKTDIIVH 601: LRNIWGETFE SWLREAEWSK KGHTSSMDEY IRNGMISIAA HTIALSISCL MEPCFPHNKL KPGNYDSITT LLMIIPRLLN DLQSYQKEQE QGKMNSVLLH 701: MKNHPGLEIE DSIAHIEKII DSKRKEFLEH VLVDGLSDLP KPCKEIHMSC CKVFEMFFNK KNRYDSNTEM LHDIKKALYD PINVYELSEM EPMPLMAHGD 801: EYMILPLLLN SLPNILEFKR KDGYGAMKTS MCFGRSYRVN KRVMASQLDD QHKPLKIVAS QRKPVPMMQS IFAPCFY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)