AT1G60730.1
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Subcellular Consensus
(Prediction and Experimental)  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? What is ASURE? SUBAcon computations |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NAD(P)-linked oxidoreductase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60710.1); Has 28070 Blast hits to 28051 proteins in 2523 species: Archae - 645; Bacteria - 18780; Metazoa - 1413; Fungi - 2112; Plants - 1222; Viruses - 0; Other Eukaryotes - 3898 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:22358327..22360082 | ||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 37859.50 Da | ||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.25 | ||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.18 | ||||||||||||||||||||||||||||||||||||||||||
| Length | 345 amino acids | ||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAEACGVRRI KLGSQGLEVS AQGLGCMGLS AFYGTPKPET EAIALIHHAI HSGVTFLDTS DIYGPETNEL LLSKALKDGV REKVELATKY GIRYAEGKVE 101: FKGDPAYVRA ACEASLMRVD VACIDLYYQH RIDTRVPIEI TIGELKKLVE EGKIKYIGLS EASASTIRRA HAVHPITALQ IEWSLWSRDV EEDIIPTCRE 201: LGIGIVAYSP LGRGFFASGP KLVENLDNND VRKTLPRFQQ ENLDHNKILF EKVSAMSEKK GCTPAQLALA WVHHQGDDVC PIPGTTKIEN LNQNIGALSV 301: KLTPEEMSEL ESLAQPGFVK GERSISILTT FKNSETPPLS SWKAA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)