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AT1G60430.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.998
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : actin-related protein C3
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
actin-related protein C3 (ARPC3); CONTAINS InterPro DOMAIN/s: ARP2/3 complex, p21-Arc subunit (InterPro:IPR007204); Has 457 Blast hits to 457 proteins in 188 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 135; Plants - 39; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink).
Protein Annotations
BioGrid:27562eggNOG:ENOG4111FTGeggNOG:KOG3155EMBL:AC004473EMBL:AY084614EMBL:BT025737EMBL:CP002684
EnsemblPlants:AT1G60430EnsemblPlants:AT1G60430.1EnsemblPlants:AT1G60430.2entrez:842338Gene3D:1.10.1760.10GeneID:842338Genevisible:Q1ECJ7
GO:GO:0005737GO:GO:0005885GO:GO:0007015GO:GO:0034314GO:GO:0042995Gramene:AT1G60430.1Gramene:AT1G60430.2
hmmpanther:PTHR12391hmmpanther:PTHR12391:SF0HOGENOM:HOG000161465InParanoid:Q1ECJ7IntAct:Q1ECJ7InterPro:IPR007204KEGG:ath:AT1G60430
KO:K05756OMA:PLNQMYEPANTHER:PTHR12391PaxDb:Q1ECJ7Pfam:PF04062Pfam:Q1ECJ7PhylomeDB:Q1ECJ7
PIR:T02293PIRSF:PIRSF016315PRIDE:Q1ECJ7PRO:PR:Q1ECJ7ProteinModelPortal:Q1ECJ7Proteomes:UP000006548RefSeq:NP_001077743.1
RefSeq:NP_564757.1SMR:Q1ECJ7STRING:3702.AT1G60430.1SUPFAM:0039968SUPFAM:SSF69060TAIR:AT1G60430tair10-symbols:ARPC3
UniGene:At.10685UniGene:At.64112UniProt:Q1ECJ7
Coordinates (TAIR10) chr1:-:22264797..22265682
Molecular Weight (calculated) 19491.60 Da
IEP (calculated) 8.04
GRAVY (calculated) 0.00
Length 174 amino acids
Sequence (TAIR10)
(BLAST)
001: MVYHSSFVDE EGVTKACGCP LLPLKSHIKG PAPVSEQDKT DIVDEAITFF RANVFFTNFD IKSPADKLLI YLTFYINVAL KRLEGCRTLA VGTKAIINLG
101: LEDIPVPGET GFPFPGLFSL PQSQDEAELF RNYLKQVREE TSGRLLSVAY RANGTPNKWW LAFAKRKFMN VVVL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)