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AT1G60270.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : beta glucosidase 6
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
beta glucosidase 6 (BGLU6); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 4 (TAIR:AT1G60090.1).
Protein Annotations
BioCyc:ARA:AT1G60270-MONOMERCAZy:GH1EC:3.2.1.21eggNOG:COG2723
eggNOG:KOG0626EMBL:AC004473EMBL:AK175453EMBL:CP002684
EnsemblPlants:AT1G60270EnsemblPlants:AT1G60270.1entrez:3767579Gene3D:3.20.20.80
GeneID:3767579Genevisible:Q682B4GO:GO:0005975GO:GO:0008422
Gramene:AT1G60270.1hmmpanther:PTHR10353hmmpanther:PTHR10353:SF29HOGENOM:HOG000088630
InParanoid:Q682B4InterPro:IPR001360InterPro:IPR013781InterPro:IPR017853
InterPro:IPR033132KEGG:ath:AT1G60270OMA:IFVANEYPANTHER:PTHR10353
PaxDb:Q682B4Pfam:PF00232Pfam:Q682B4PIR:T02279
PROSITE:PS00653ProteinModelPortal:Q682B4Proteomes:UP000006548RefSeq:NP_176233.2
scanprosite:PS00653SMR:Q682B4STRING:3702.AT1G60270.1SUPFAM:SSF51445
TAIR:AT1G60270tair10-symbols:BGLU6UniGene:At.49989UniProt:Q682B4
Coordinates (TAIR10) chr1:-:22222266..22224257
Molecular Weight (calculated) 42588.70 Da
IEP (calculated) 5.08
GRAVY (calculated) -0.33
Length 379 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKTFALITI FLAFAFSGKC SDVFSRCDFP EGFVFGSSTS AYQWEGAVAE DGRKPSVWDR FCHSHNNQGN GDITCDGYHK YKEDVKLMVD TNLDAFRFSI
101: SWSRLIPNRR GPVNQKGLQF YKNLIQELVN HGIEPYVTLH HFDHPQYLED EYEGWLNHMI VEDFTAYADV CFREFGNHVK FWTTINEGNI FSIGGYNDGD
201: SPPGRCSIPG QNCLLGNSST EPYIVGHNLL LAHASVSRLY KQNYKDKQGG SIGFSILTIG FSPSTSSKDD AIATQRANDF FNGWMLGPLI YGDYPDTMKR
301: IVGSRMPVFS EEESEQVKGS SDYIGINHYL AASITNSKLK PSISGNPDFY SDMNVILSFF ANFSSSEYDV APWAIEAVL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)