suba logo
AT1G60160.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
vacuole 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:18686298 (2008): plant-type vacuole plant-type vacuole membrane
  • PMID:15028209 (2004): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Potassium transporter family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Potassium transporter family protein; FUNCTIONS IN: potassium ion transmembrane transporter activity; INVOLVED IN: potassium ion transport; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Potassium uptake protein, kup (InterPro:IPR018519), K+ potassium transporter (InterPro:IPR003855); BEST Arabidopsis thaliana protein match is: K+ uptake permease 7 (TAIR:AT5G09400.1); Has 3447 Blast hits to 3411 proteins in 1044 species: Archae - 13; Bacteria - 2434; Metazoa - 1; Fungi - 101; Plants - 776; Viruses - 4; Other Eukaryotes - 118 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-748-MONOMERBioGrid:27536eggNOG:COG3158eggNOG:ENOG410IEMH
EMBL:AC004473EMBL:CP002684EnsemblPlants:AT1G60160EnsemblPlants:AT1G60160.1
entrez:842311GeneID:842311Genevisible:O80739GO:GO:0005886
GO:GO:0009507GO:GO:0015079GO:GO:0016021Gramene:AT1G60160.1
hmmpanther:PTHR30540hmmpanther:PTHR30540:SF4HOGENOM:HOG000218032InParanoid:O80739
IntAct:O80739InterPro:IPR003855iPTMnet:O80739KEGG:ath:AT1G60160
KO:K03549OMA:VCPKDYHPaxDb:O80739Pfam:O80739
Pfam:PF02705PhylomeDB:O80739PIR:T02268PRIDE:O80739
PRO:PR:O80739ProteinModelPortal:O80739Proteomes:UP000006548RefSeq:NP_176222.2
STRING:3702.AT1G60160.1TAIR:AT1G60160TIGRfam:TIGR00794TIGRFAMs:TIGR00794
TMHMM:TMhelixUniGene:At.49988UniProt:O80739
Coordinates (TAIR10) chr1:-:22188330..22191395
Molecular Weight (calculated) 92093.50 Da
IEP (calculated) 7.61
GRAVY (calculated) 0.38
Length 827 amino acids
Sequence (TAIR10)
(BLAST)
001: MEEIEEGSSN NSIRRVGTGS SDRRWVDGSE VDSETPLFSE IRDRDYSFGN LRRRLMKKPK RADSLDVEAM EIAGSHGHNL KDLSLLTTLG IAFQTLGVVY
101: GDMGTSPLYV FSDVFSKVPI RSEVDVLGAL SLVIYTIAVI PLAKYVFVVL KANDNGEGGT FALYSLICRY AKVNKLPNQQ PADEQISSFR LKLPTPELER
201: ALGIKEALET KGYLKTLLLL LVLMGTSMII GDGILTPAMS VMSAMSGLQG EVKGFGTNAL VMSSIVILVA LFSIQRFGTG KVGFLFAPVL ALWFFSLGAI
301: GIYNLLKYDF TVIRALNPFY IVLFFNKNSK QAWSALGGCV LCITGAEAMF ADLGHFSVRS IQMAFTCVVF PCLLLAYMGQ AAYLTKHPEA SARIFYDSVP
401: KSLFWPVFVI ATLAAMIASQ AMISATFSCV KQAMALGCFP RLKIIHTSKK RIGQIYIPVI NWFLMIMCIL VVSIFRSTTH IANAYGIAEV GVMMVSTVLV
501: TLVMLLIWQT NIFLALCFPL IFGSVETIYL LAVLTKILEG GWVPLVFATF FLTVMYIWNY GSVLKYQSEV RERISMDFMR ELGSTLGTIR IPGIGLLYNE
601: LVQGIPSIFG QFLLTLPAIH STIIFVCIKY VPVPVVPQEE RFLFRRVCPK DYHMFRCIAR YGYKDVRKED SRVFEQLLIE SLEKFLRCEA LEDALESTLN
701: DFDPDRVSVA SDTYTDDLMA PLIHRAKRSE PEQELDSEVL PSSSVGSSME EDPALEYELA ALREATDSGL TYLLAHGDVR AKKNSIFVKK LVINYFYAFL
801: RRNCRAGAAN LTVPHMNILQ AGMTYMV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)