AT1G60060.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Serine/threonine-protein kinase WNK (With No Lysine)-related | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Serine/threonine-protein kinase WNK (With No Lysine)-related; BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase WNK (With No Lysine)-related (TAIR:AT5G53900.2); Has 3565 Blast hits to 2565 proteins in 80 species: Archae - 0; Bacteria - 3; Metazoa - 15; Fungi - 88; Plants - 227; Viruses - 0; Other Eukaryotes - 3232 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:22139282..22141585 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 43521.40 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 6.35 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.65 | ||||||||||||||||||||||||||||
| Length | 386 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEHLNPLAV THLLQHTLRS LCIHENSQWV YAVFWRILPR NYPPPKWDGQ GAYDRSRGNR RNWILVWEDG FCNFAASAAE MSSGEGSGGG GGSAAYGNSD 101: FQQYQGLQPE LFFKMSHEIY NYGEGLIGKV AADHSHKWIY KEPNDQEINF LSAWHNSADS YPRTWEAQFQ SGIKTIALIS VREGVVQLGA VHKVIEDLSY 201: VVMLRKKLSY IESIPGVLLP HPSSSGYPFI NASPSDTWHF PGVAPPHQQP EHQFYHSDHN HRFLIGHHNQ PQAVGGAAPP LPLSMKITPS MSSLEALLSK 301: LPSVVPPATQ PGYYPFHHSA KEEMSQEEQN DAFRVERNDL VGEGSNNHNH NNNYNSNNDI YNYSNNCSNN NYDRENKIGG FLSEDY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)