suba logo
AT1G59700.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
cytosol 0.996
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glutathione S-transferase TAU 16
Curator
Summary (TAIR10)
Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
Computational
Description (TAIR10)
glutathione S-transferase TAU 16 (GSTU16); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 15 (TAIR:AT1G59670.1); Has 5165 Blast hits to 5149 proteins in 1027 species: Archae - 0; Bacteria - 2130; Metazoa - 418; Fungi - 155; Plants - 1971; Viruses - 0; Other Eukaryotes - 491 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G59700-MONOMEREC:2.5.1.18eggNOG:ENOG410XSIXeggNOG:KOG0406EMBL:AC007258EMBL:AC009317EMBL:AF370480
EMBL:BT014880EMBL:CP002684EnsemblPlants:AT1G59700EnsemblPlants:AT1G59700.1entrez:842261Gene3D:1.20.1050.10Gene3D:3.40.30.10
GeneID:842261Genevisible:Q9XIF8GO:GO:0004364GO:GO:0005737GO:GO:0005829GO:GO:0006749GO:GO:0009407
GO:GO:0009636Gramene:AT1G59700.1hmmpanther:PTHR11260hmmpanther:PTHR11260:SF250HOGENOM:HOG000125749InParanoid:Q9XIF8InterPro:IPR004045
InterPro:IPR004046InterPro:IPR010987InterPro:IPR012336KEGG:ath:AT1G59700KO:K00799OMA:MDICFGSPaxDb:Q9XIF8
Pfam:PF00043Pfam:PF02798Pfam:Q9XIF8Pfscan:PS50404Pfscan:PS50405PhylomeDB:Q9XIF8PIR:F96620
PRIDE:Q9XIF8PRO:PR:Q9XIF8PROSITE:PS50404PROSITE:PS50405ProteinModelPortal:Q9XIF8Proteomes:UP000006548RefSeq:NP_176178.1
SMR:Q9XIF8STRING:3702.AT1G59700.1SUPFAM:SSF47616SUPFAM:SSF52833TAIR:AT1G59700tair10-symbols:ATGSTU16tair10-symbols:GSTU16
UniGene:At.24264UniProt:Q9XIF8
Coordinates (TAIR10) chr1:+:21936459..21937763
Molecular Weight (calculated) 26507.80 Da
IEP (calculated) 5.26
GRAVY (calculated) -0.24
Length 234 amino acids
Sequence (TAIR10)
(BLAST)
001: MGEKEEVKLL GVWYSPYAIR PKIALRLKSV DYDYVEENLF GSKSELLLKS NPVHKKVPVL LHNNKPIVES LNIVEYIDET WNSSAPSILP SHPYDRALAR
101: FWSDFVDNKW FPALRMAAIT KSEDAKAKAM EEVEEGLLQL EDAFVSISKG KPFFGGEAIG FMDICFGSFV VLLKAREKFK AEKLLDESKT PSLCKWADRF
201: LSDETVKNVA PEIEKVAEFL QELEVRAQSA ASRS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)