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AT1G59620.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Disease resistance protein (CC-NBS-LRR class) family
Curator
Summary (TAIR10)
Encodes CW9.
Computational
Description (TAIR10)
CW9; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58390.1); Has 13938 Blast hits to 13448 proteins in 451 species: Archae - 2; Bacteria - 565; Metazoa - 179; Fungi - 69; Plants - 13061; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink).
Protein Annotations
EMBL:DQ526929EMBL:DQ526932EMBL:DQ526949EMBL:DQ526950EMBL:DQ526966EMBL:DQ526974EMBL:DQ526988
EMBL:DQ526993EnsemblPlants:AT1G59620EnsemblPlants:AT1G59620.1entrez:842252ExpressionAtlas:Q19HT0ExpressionAtlas:Q19HT5ExpressionAtlas:Q19HU1
ExpressionAtlas:Q19HU6ExpressionAtlas:Q19HV8ExpressionAtlas:Q19HV9Gene3D:3.80.10.10InterPro:IPR032675Pfam:PF00931SUPFAM:SSF52058
tair10-symbols:CW9UniProt:G1JSJ6UniProt:Q19HS9UniProt:Q19HT0UniProt:Q19HT1UniProt:Q19HT2UniProt:Q19HT3
UniProt:Q19HT4UniProt:Q19HT5UniProt:Q19HT7UniProt:Q19HT9UniProt:Q19HU0UniProt:Q19HU1UniProt:Q19HU2
UniProt:Q19HU5UniProt:Q19HU6UniProt:Q19HU7UniProt:Q19HU8UniProt:Q19HV1UniProt:Q19HV6UniProt:Q19HV8
UniProt:Q19HV9UniProt:Q19HW2UniProt:Q19HW3UniProt:Q19HW4UniProt:Q19HW6UniProt:Q19HX0UniProt:Q19HX1
Coordinates (TAIR10) chr1:+:21902627..21905527
Molecular Weight (calculated) 97860.80 Da
IEP (calculated) 8.17
GRAVY (calculated) -0.29
Length 842 amino acids
Sequence (TAIR10)
(BLAST)
001: MAETLLSFGV EKLWDLLVRE SDRFQGVKKQ FNELRSDLNK LRCFLEDADA KKHQSAMVSN TVKEVKEIVY DTEDIIETFL RKKQLGRTRG MKKRIKEFAC
101: VLPDRRKIAI DMEGLSKRIA KVICDMQSLG VQQENVKKLV GHLVEVEDSS QVVSITGMGG IGKTTLARQV FNHETVKSHF AQLAWVCVSQ QFTRKYVWQT
201: ILRKVGPEYI KLEMTEDELQ EKLFRLLGTR KALIVLDDIW REEDWDMIEP IFPLGKGWKV LLTSRNEGVA LRANPNGFIF KPDCLTPEES WTIFRRIVFP
301: GENTTEYKVD EKMEELGKQM IKHCGGLPLA LKVLGGLLVV HFTLDEWKRI YGNIKSHIVG GTSFNDKNMS SVYHILHLSF EELPIYLKHC FLYLAQFPED
401: FTIDLEKLSY YWAAEGMPRP RYYDGATIRK VGDGYIEELV KRNMVISERD ARTRRFETCH LHDIVREVCL LKAEEENLIE TENSKSPSKP RRLVVKGGDK
501: TDMEGKLKNP KLRSLLFIEE LGGYRGFEVW FTRLQLMRVL DLHGVEFGGE LPSSIGLLIH LRYLSLYRAK ASHLPSSMQN LKMLLYLNLC VQESCYIYIP
601: NFLKEMLELK YLSLPLRMDD KSMGEWGDLQ FMTRLRALSI YIRGRLNMKT LSSSLSKLRD LENLTICYYP MYAPMSGIEG LVLDCDQLKH LNLRIYMPRL
701: PDEQHFPWHL RNISLAECCL KEDPMPILEK LLQLNEVSLS HQSFCGKRMV CSDGGFPQLQ KLDLCGLEEW EEWIVEEGSM PRLHKLTIRN DPKLKELPDG
801: LKFITSLKEV HVILNNWDFK KKLSRGGEDY YKVQHIPLVR FL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)