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AT1G59530.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : basic leucine-zipper 4
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
basic leucine-zipper 4 (bZIP4); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 7 (TAIR:AT4G37730.1); Has 1059 Blast hits to 1059 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 57; Fungi - 2; Plants - 987; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J2J6eggNOG:ENOG411180JEMBL:AB493509EMBL:AC009317EMBL:AC027036EMBL:AF400619EMBL:CP002684
EMBL:DQ446373EnsemblPlants:AT1G59530EnsemblPlants:AT1G59530.1entrez:842243GeneID:842243GO:GO:0003700GO:GO:0043565
Gramene:AT1G59530.1hmmpanther:PTHR22952hmmpanther:PTHR22952:SF149IntAct:Q9LQ65InterPro:IPR004827KEGG:ath:AT1G59530ncoils:Coil
OMA:RTISNREPfam:PF00170Pfscan:PS50217PhylomeDB:Q9LQ65PROSITE:PS00036PROSITE:PS50217Proteomes:UP000006548
RefSeq:NP_176162.1scanprosite:PS00036SMART:SM00338SMR:Q9LQ65STRING:3702.AT1G59530.1SUPFAM:SSF57959TAIR:AT1G59530
tair10-symbols:ATBZIP4tair10-symbols:bZIP4UniGene:At.26572UniProt:Q9LQ65
Coordinates (TAIR10) chr1:+:21868262..21868708
Molecular Weight (calculated) 17235.60 Da
IEP (calculated) 8.04
GRAVY (calculated) -0.55
Length 148 amino acids
Sequence (TAIR10)
(BLAST)
001: MFYTNMETVH NCFNDATITG DEIIDILAFL QSDESDNPSG INEVVPVDDK KRRRTISNRE SAKRSRMKKK KRFEELTEEV NRLNIRNQEL KNRLANVVSC
101: GNFISRENNR LKTESVCLEI RLLELYRFLV AMQSPISTSV NYITTLEI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)