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AT1G58180.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : beta carbonic anhydrase 6
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
beta carbonic anhydrase 6 (BCA6); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: carbon utilization; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: beta carbonic anhydrase 5 (TAIR:AT4G33580.1); Has 5006 Blast hits to 4991 proteins in 1499 species: Archae - 55; Bacteria - 3848; Metazoa - 56; Fungi - 209; Plants - 346; Viruses - 0; Other Eukaryotes - 492 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G58180-MONOMERBioCyc:ARA:GQT-200-MONOMERBioCyc:ARA:GQT-202-MONOMERBioCyc:ARA:GQT-203-MONOMEREC:4.2.1.1eggNOG:COG0288eggNOG:KOG1578
EMBL:AC079131EMBL:AC079604EMBL:AK316811EMBL:AY120772EMBL:BT000145EMBL:CP002684EnsemblPlants:AT1G58180
EnsemblPlants:AT1G58180.1EnsemblPlants:AT1G58180.2EnsemblPlants:AT1G58180.3EnsemblPlants:AT1G58180.4entrez:842185ExpressionAtlas:Q9C6F5Gene3D:3.40.1050.10
GeneID:842185Genevisible:Q9C6F5GO:GO:0004089GO:GO:0005739GO:GO:0008270GO:GO:0015976gramene_pathway:4.2.1.1
gramene_pathway:CYANCAT-PWYhmmpanther:PTHR11002hmmpanther:PTHR11002:SF19HOGENOM:HOG000125183InParanoid:Q9C6F5InterPro:IPR001765InterPro:IPR015892
KEGG:00910+4.2.1.1KEGG:ath:AT1G58180KO:K01673OMA:ITYSWIRPANTHER:PTHR11002PaxDb:Q9C6F5Pfam:PF00484
PhylomeDB:Q9C6F5PIR:B96615PRIDE:Q9C6F5PRO:PR:Q9C6F5PROSITE:PS00704PROSITE:PS00705ProteinModelPortal:Q9C6F5
Proteomes:UP000006548RefSeq:NP_001031206.1RefSeq:NP_001185259.1RefSeq:NP_176114.2RefSeq:NP_849823.1scanprosite:PS00704scanprosite:PS00705
SMART:SM00947SMR:Q9C6F5STRING:3702.AT1G58180.2SUPFAM:SSF53056TAIR:AT1G58180tair10-symbols:ATBCA6tair10-symbols:BCA6
UniGene:At.25362UniProt:F4I9R8UniProt:Q8L833
Coordinates (TAIR10) chr1:-:21538010..21539711
Molecular Weight (calculated) 29114.10 Da
IEP (calculated) 9.31
GRAVY (calculated) -0.37
Length 256 amino acids
Sequence (TAIR10)
(BLAST)
001: MAFTLGGRAR RLVSATSVHQ NGCLHKLQQI GSDRFQLGEA KAIRLLPRRT NMVQELGIRE EFMDLNRETE TSYDFLDEMR HRFLKFKRQK YLPEIEKFKA
101: LAIAQSPKVM VIGCADSRVC PSYVLGFQPG EAFTIRNVAN LVTPVQNGPT ETNSALEFAV TTLQVENIIV MGHSNCGGIA ALMSHQNHQG QHSSLVERWV
201: MNGKAAKLRT QLASSHLSFD EQCRNCEKES IKDSVMNLIT YSWIRDRVKR DREIWS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)