AT1G58110.1::SUBA5

AT1G58110.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?

Predictors

External Curations

no data

Experimental Localisations and PPI

FP	MS/MS	PPI
	PMID:28865150 (2017): extracellular region plant-type cell wall	PMID:28650476 (2017): AT1G58100.1:None: PMID:28650476 (2017): AT1G01920.1:None: PMID:28650476 (2017): AT1G69690.1:None: PMID:28650476 (2017): AT5G64750.1:None: PMID:28650476 (2017): AT2G31370.1:None: PMID:28650476 (2017): AT1G06850.1:None: PMID:28650476 (2017): AT1G30490.1:None: PMID:28650476 (2017): AT1G06070.1:None: PMID:28650476 (2017): AT1G43700.1:None: PMID:28650476 (2017): AT1G31140.1:None: PMID:28650476 (2017): AT1G51140.1:None: PMID:21798944 (2011): AT5G60340.1:Y2H: PMID:17360592 (2007): AT2G41090.1:protein array: PMID:17360592 (2007): AT3G51920.1:protein array: PMID:17360592 (2007): AT5G21274.1:other: PMID:17360592 (2007): AT5G37780.1:other: PMID:17360592 (2007): AT4G14640.1:other: PMID:17360592 (2007): AT2G41100.1:other: PMID:17360592 (2007): AT1G66410.1:other: PMID:17360592 (2007): AT3G43810.1:other:

SUBAcon links
AGI-AGI relationships

Coexpression	PPI
AT3G46510.1 cytosol, nucleus [5.02] AT2G33170.1 plasma membrane [4.86] AT1G49850.1 nucleus [4.86] AT1G32330.1 nucleus [4.35] AT3G59090.1 plasma membrane [4.13] AT1G10210.1 nucleus [4.13] AT3G01090.1 cytosol [4.05] AT1G76990.1 nucleus [3.99] AT5G35200.1 nucleus [3.96] AT1G48210.1 plasma membrane [3.96]	AT1G01920.1 cytosol AT1G06070.1 nucleus AT1G06850.1 nucleus AT1G30490.1 nucleus AT1G31140.1 nucleus AT1G43700.1 nucleus AT1G51140.1 nucleus AT1G58100.1 nucleus AT1G69690.1 nucleus AT2G31370.1 nucleus AT5G64750.1 nucleus

Description (TAIR10)

protein_coding : Basic-leucine zipper (bZIP) transcription factor family protein

Curator
Summary (TAIR10)

Computational
Description (TAIR10)

Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: protein dimerization activity, sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G06598.1); Has 705 Blast hits to 699 proteins in 92 species: Archae - 0; Bacteria - 3; Metazoa - 72; Fungi - 25; Plants - 569; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).

Protein Annotations

eggNOG:ENOG410IG9V	eggNOG:ENOG410YFJG	EMBL:CP002684	EnsemblPlants:AT1G58110
EnsemblPlants:AT1G58110.1	EnsemblPlants:AT1G58110.2	entrez:842178	GeneID:842178
GO:GO:0003700	GO:GO:0043565	Gramene:AT1G58110.1	Gramene:AT1G58110.2
hmmpanther:PTHR13301	hmmpanther:PTHR13301:SF25	InterPro:IPR004827	KEGG:ath:AT1G58110
ncoils:Coil	OMA:VEELPFW	Proteomes:UP000006548	RefSeq:NP_001031205.1
RefSeq:NP_176108.3	SMART:SM00338	SMR:F4I9R1	SUPFAM:SSF57959
TAIR:AT1G58110	UniGene:At.36926	UniProt:F4I9R1

Coordinates (TAIR10)

chr1:-:21515919..21517374

Molecular Weight (calculated)

42103.30 Da

IEP (calculated)

9.79

GRAVY (calculated)

-0.83

Length

374 amino acids

Sequence (TAIR10)
(BLAST)

001: MASSKGSQSV RNLMYPGKHA LLPPKIPFPS VSASYSEYIP TGLIGSRHGQ KLSNEKTHHQ RTSSESHLVE ELPFWLDDLL NEQPESPARK CGHRRSSSDS
101: YAYLDVANAT NISLTLQNDF SYRNTVLSTQ RGVQELDRNK NAQDAAFYSG ASFLKQKSRQ RDSLVATGAC PSWLPFAREN GGGKNLGALY MSQDATVISS
201: ERKNYAEPFS HDPKMLSSEE NNSNPSPVTY EADNTKRAKQ QFAQRSRVRK LQYISELERN VQTLQAEGSK VSAELDFLNQ RNLILSMENK ALKKRLESIA
301: QEKLIKQLEQ EVLEKEIGRL RALYQQQQQT QKPSASRGRA TSKDLDSQFS SLSLNTKDSN CRRDSVSVMG QFHF