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AT1G58110.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Basic-leucine zipper (bZIP) transcription factor family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: protein dimerization activity, sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G06598.1); Has 705 Blast hits to 699 proteins in 92 species: Archae - 0; Bacteria - 3; Metazoa - 72; Fungi - 25; Plants - 569; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IG9VeggNOG:ENOG410YFJGEMBL:CP002684EnsemblPlants:AT1G58110EnsemblPlants:AT1G58110.1EnsemblPlants:AT1G58110.2entrez:842178
GeneID:842178GO:GO:0003700GO:GO:0043565Gramene:AT1G58110.1Gramene:AT1G58110.2hmmpanther:PTHR13301hmmpanther:PTHR13301:SF25
InterPro:IPR004827KEGG:ath:AT1G58110ncoils:CoilOMA:VEELPFWProteomes:UP000006548RefSeq:NP_001031205.1RefSeq:NP_176108.3
SMART:SM00338SMR:F4I9R1SUPFAM:SSF57959TAIR:AT1G58110UniGene:At.36926UniProt:F4I9R1
Coordinates (TAIR10) chr1:-:21515919..21517374
Molecular Weight (calculated) 42103.30 Da
IEP (calculated) 9.79
GRAVY (calculated) -0.83
Length 374 amino acids
Sequence (TAIR10)
(BLAST)
001: MASSKGSQSV RNLMYPGKHA LLPPKIPFPS VSASYSEYIP TGLIGSRHGQ KLSNEKTHHQ RTSSESHLVE ELPFWLDDLL NEQPESPARK CGHRRSSSDS
101: YAYLDVANAT NISLTLQNDF SYRNTVLSTQ RGVQELDRNK NAQDAAFYSG ASFLKQKSRQ RDSLVATGAC PSWLPFAREN GGGKNLGALY MSQDATVISS
201: ERKNYAEPFS HDPKMLSSEE NNSNPSPVTY EADNTKRAKQ QFAQRSRVRK LQYISELERN VQTLQAEGSK VSAELDFLNQ RNLILSMENK ALKKRLESIA
301: QEKLIKQLEQ EVLEKEIGRL RALYQQQQQT QKPSASRGRA TSKDLDSQFS SLSLNTKDSN CRRDSVSVMG QFHF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)