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AT1G58080.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:21531424 (2011): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:18431481 (2008): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ATP phosphoribosyl transferase 1
Curator
Summary (TAIR10)
ATP phosphoribosyl transferase, catalyses first step of histidine biosynthesis
Computational
Description (TAIR10)
ATP phosphoribosyl transferase 1 (ATP-PRT1); FUNCTIONS IN: ATP phosphoribosyltransferase activity; INVOLVED IN: histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine biosynthesis HisG: ATP phosphoribosyltransferase (InterPro:IPR001348), ATP phosphoribosyltransferase, conserved site (InterPro:IPR018198), ATP phosphoribosyltransferase, catalytic domain (InterPro:IPR013820), Histidine biosynthesis HisG, C-terminal (InterPro:IPR013115), Nitrogen regulatory PII-like, alpha/beta (InterPro:IPR011322); BEST Arabidopsis thaliana protein match is: ATP phosphoribosyl transferase 2 (TAIR:AT1G09795.1); Has 6414 Blast hits to 6414 proteins in 2199 species: Archae - 208; Bacteria - 4137; Metazoa - 2; Fungi - 141; Plants - 73; Viruses - 0; Other Eukaryotes - 1853 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT1G58080-MONOMERBRENDA:2.4.2.17EC:2.4.2.17eggNOG:COG0040eggNOG:KOG2831EMBL:AB025249EMBL:AB025251
EMBL:AC079604EMBL:AY093018EMBL:AY128941EMBL:CP002684EnsemblPlants:AT1G58080EnsemblPlants:AT1G58080.1entrez:842175
Gene3D:3.30.70.120GeneID:842175Genevisible:Q9S762GO:GO:0000105GO:GO:0000287GO:GO:0003879GO:GO:0009507
GO:GO:0009570Gramene:AT1G58080.1gramene_pathway:2.4.2.17gramene_pathway:HISTSYN-PWYgramene_plant_reactome:1119509gramene_plant_reactome:6874326hmmpanther:PTHR21403
hmmpanther:PTHR21403:SF0HOGENOM:HOG000223249InParanoid:Q9S762InterPro:IPR001348InterPro:IPR011322InterPro:IPR013115InterPro:IPR013820
InterPro:IPR015867InterPro:IPR018198KEGG:00340+2.4.2.17KEGG:ath:AT1G58080KO:K00765OMA:ACEATPHPANTHER:PTHR21403
PaxDb:Q9S762Pfam:PF01634Pfam:PF08029Pfam:Q9S762PhylomeDB:Q9S762PIR:T51818PRIDE:Q9S762
PRO:PR:Q9S762PROSITE:PS01316ProteinModelPortal:Q9S762Proteomes:UP000006548RefSeq:NP_176105.1scanprosite:PS01316SMR:Q9S762
STRING:3702.AT1G58080.1SUPFAM:SSF53850SUPFAM:SSF54913TAIR:AT1G58080tair10-symbols:ATATP-PRT1tair10-symbols:ATP-PRT1tair10-symbols:HISN1A
TIGRfam:TIGR00070TIGRfam:TIGR03455TIGRFAMs:TIGR00070TIGRFAMs:TIGR03455UniGene:At.476UniPathway:UPA00031UniProt:Q9S762
Coordinates (TAIR10) chr1:-:21504562..21507429
Molecular Weight (calculated) 44558.70 Da
IEP (calculated) 6.37
GRAVY (calculated) -0.02
Length 411 amino acids
Sequence (TAIR10)
(BLAST)
001: MSLLLPTNLQ QYPSSSSFPS STPILSPPPS TAFSVIVPRR RCLRLVTSCV STVQSSVATN GSSPAPAPAA VVVERDQIRL GLPSKGRMAA DAIDLLKDCQ
101: LFVKQVNPRQ YVAQIPQLPN TEVWFQRPKD IVRKLLSGDL DLGIVGLDTL SEYGQENEDL IIVHEALNFG DCHLSIAIPN YGIFENINSL KELAQMPQWS
201: EERPLRLATG FTYLGPKFMK ENGIKHVVFS TADGALEAAP AMGIADAILD LVSSGITLKE NNLKEIEGGV VLESQAALVA SRRALNERKG ALNTVHEILE
301: RLEAHLKADG QFTVVANMRG NSAQEVAERV LSQPSLSGLQ GPTISPVYCT QNGKVSVDYY AIVICVPKKA LYDSVKQLRA AGGSGVLVSP LTYIFDEDTP
401: RWGQLLRNLG I
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)