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AT1G57540.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 29 Blast hits to 29 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZ66eggNOG:ENOG410YRQHEMBL:AC079733EMBL:AK117115EMBL:BT004691EMBL:CP002684EnsemblPlants:AT1G57540
EnsemblPlants:AT1G57540.1EnsemblPlants:AT1G57540.2EnsemblPlants:AT1G57540.3entrez:842129GeneID:842129GO:GO:0016021Gramene:AT1G57540.1
Gramene:AT1G57540.2Gramene:AT1G57540.3hmmpanther:PTHR36331hmmpanther:PTHR36331:SF1HOGENOM:HOG000237720KEGG:ath:AT1G57540OMA:SLRWAAC
PhylomeDB:Q9FVU7PIR:C96609Proteomes:UP000006548RefSeq:NP_001077732.1RefSeq:NP_564723.1RefSeq:NP_974042.1TAIR:AT1G57540
TMHMM:TMhelixUniGene:At.42718UniProt:Q9FVU7
Coordinates (TAIR10) chr1:-:21310478..21311215
Molecular Weight (calculated) 11269.80 Da
IEP (calculated) 9.88
GRAVY (calculated) 0.02
Length 103 amino acids
Sequence (TAIR10)
(BLAST)
001: MALRQKLGWS EGDLMRSDAK PCSRLMKQTA AIFTVGGALG FWVLCRLHYG PRITVPRSLR WAGCGALSVS TSTAMLVRLF SPECEPQNIA AYDNIKTPQA
101: SLP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)