AT1G56660.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; Has 665200 Blast hits to 205811 proteins in 4684 species: Archae - 3320; Bacteria - 107592; Metazoa - 249086; Fungi - 76753; Plants - 38542; Viruses - 3008; Other Eukaryotes - 186899 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:21238809..21240377 | ||||||||||||||||||||
| Molecular Weight (calculated) | 60751.70 Da | ||||||||||||||||||||
| IEP (calculated) | 8.87 | ||||||||||||||||||||
| GRAVY (calculated) | -2.35 | ||||||||||||||||||||
| Length | 522 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSNQENAKE EKLHVKIKTQ ELDPKEKGEN VEVEMEVKAK SIEKVKAKKD EESSGKSKKD KEKKKGKNVD SEVKEDKDDD KKKDGKMVSK KHEEGHGDLE 101: VKESDVKVEE HEKEHKKGKE KKHEELEEEK EGKKKKNKKE KDESGPEEKN KKADKEKKHE DVSQEKEELE EEDGKKNKKK EKDESGTEEK KKKPKKEKKQ 201: KEESKSNEDK KVKGKKEKGE KGDLEKEDEE KKKEHDETDQ EMKEKDSKKN KKKEKDESCA EEKKKKPDKE KKEKDESTEK EDKKLKGKKG KGEKPEKEDE 301: GKKTKEHDAT EQEMDDEAAD HKEGKKKKNK DKAKKKETVI DEVCEKETKD KDDDEGETKQ KKNKKKEKKS EKGEKDVKED KKKENPLETE VMSRDIKLEE 401: PEAEKKEEDD TEEKKKSKVE GGESEEGKKK KKKDKKKNKK KDTKEPKMTE DEEEKKDDSK DVKIEGSKAK EEKKDKDVKK KKGGNDIGKL KTKLAKIDEK 501: IGALMEEKAE IENQIKDAEG EQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)