AT1G56100.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 ASURE: extracellular What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Plant invertase/pectin methylesterase inhibitor superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, sepal; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT4G00872.1); Has 709 Blast hits to 557 proteins in 124 species: Archae - 2; Bacteria - 33; Metazoa - 218; Fungi - 65; Plants - 80; Viruses - 2; Other Eukaryotes - 309 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:20980369..20983979 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 25860.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.52 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.61 | ||||||||||||||||||||||||||||||||
| Length | 232 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTIMIKFLLL ALLVISPICA EKDLMKEECH NAQVPTICMQ CLESDPTSVH ADRVGIAEII IHCLDSRLDI ITKQKGELQI GEVVEKKTRK RKSKSDNKIR 101: KKPSVETPTE AKALKVVDNL LAELNQTTDD AEKEGIIDVV NATSEAIENE TEVDLKEKDG DEEAKSEKPK KKKEQRKSRF KKMESLSSIT MKSEDVNHDQ 201: LPSKQSGLET VRDVENASSS KKAIVDVTSS EA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)