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AT1G55920.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.500
plastid 0.500
ASURE: cytosol,plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : serine acetyltransferase 2;1
Curator
Summary (TAIR10)
Encodes a chloroplast/cytosol localized serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.
Computational
Description (TAIR10)
serine acetyltransferase 2;1 (SERAT2;1); FUNCTIONS IN: serine O-acetyltransferase activity; INVOLVED IN: cellular response to sulfate starvation, response to cold; LOCATED IN: cytosol, chloroplast, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: serine acetyltransferase 2;2 (TAIR:AT3G13110.1); Has 24449 Blast hits to 24415 proteins in 2638 species: Archae - 407; Bacteria - 18561; Metazoa - 8; Fungi - 223; Plants - 250; Viruses - 18; Other Eukaryotes - 4982 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G55920-MONOMERBioCyc:MetaCyc:AT1G55920-MONOMERBioGrid:27268BRENDA:2.3.1.30DIP:DIP-40647NEC:2.3.1.30eggNOG:COG1045
eggNOG:ENOG410INAFEMBL:AC002304EMBL:AK227691EMBL:BT008309EMBL:CP002684EMBL:L34076EMBL:L42212
EMBL:Z34888EnsemblPlants:AT1G55920EnsemblPlants:AT1G55920.1entrez:842043EvolutionaryTrace:Q42588GeneID:842043Genevisible:Q42588
GO:GO:0005634GO:GO:0005829GO:GO:0006535GO:GO:0009001GO:GO:0009409GO:GO:0009507GO:GO:0009970
Gramene:AT1G55920.1gramene_pathway:2.3.1.30gramene_pathway:CYSTSYN-PWYhmmpanther:PTHR23416hmmpanther:PTHR23416:SF56HOGENOM:HOG000049437InParanoid:Q42588
IntAct:Q42588InterPro:IPR001451InterPro:IPR005881InterPro:IPR010493InterPro:IPR011004InterPro:IPR018357KEGG:00270+2.3.1.30
KEGG:00920+2.3.1.30KEGG:ath:AT1G55920KO:K00640OMA:YASITSHPaxDb:Q42588PDB:2ISQPDBsum:2ISQ
Pfam:PF00132Pfam:PF06426Pfam:Q42588PhylomeDB:Q42588PIR:S67482PIR:S71181PRIDE:Q42588
PRO:PR:Q42588PROSITE:PS00101ProteinModelPortal:Q42588Proteomes:UP000006548RefSeq:NP_175988.1SABIO-RK:Q42588scanprosite:PS00101
SMART:SM00971SMR:Q42588STRING:3702.AT1G55920.1SUPFAM:SSF51161TAIR:AT1G55920tair10-symbols:ATSERAT2;1tair10-symbols:SAT1
tair10-symbols:SAT5tair10-symbols:SERAT2;1TIGRfam:TIGR01172TIGRFAMs:TIGR01172UniGene:At.24052UniPathway:UPA00136UniProt:Q42588
Coordinates (TAIR10) chr1:+:20912378..20913322
Molecular Weight (calculated) 34253.10 Da
IEP (calculated) 6.93
GRAVY (calculated) -0.09
Length 314 amino acids
Sequence (TAIR10)
(BLAST)
001: MATCIDTCRT GNTQDDDSRF CCIKNFFRPG FSVNRKIHHT QIEDDDDVWI KMLEEAKSDV KQEPILSNYY YASITSHRSL ESALAHILSV KLSNLNLPSN
101: TLFELFISVL EESPEIIEST KQDLIAVKER DPACISYVHC FLGFKGFLAC QAHRIAHTLW KQNRKIVALL IQNRVSESFA VDIHPGAKIG KGILLDHATG
201: VVIGETAVVG DNVSILHGVT LGGTGKQSGD RHPKIGDGVL IGAGSCILGN ITIGEGAKIG SGSVVVKDVP ARTTAVGNPA RLIGGKENPR KHDKIPCLTM
301: DQTSYLTEWS DYVI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)