AT1G55830.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF812 (InterPro:IPR008530); Has 10940 Blast hits to 7289 proteins in 653 species: Archae - 228; Bacteria - 791; Metazoa - 6174; Fungi - 805; Plants - 342; Viruses - 19; Other Eukaryotes - 2581 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:20867918..20869698 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 47959.80 Da | ||||||||||||||||||||||||
| IEP (calculated) | 4.98 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.82 | ||||||||||||||||||||||||
| Length | 412 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MCCLRQFLHP SEDDSYRLVR FLVERLSEIS EGRKTLTAGD IASRPKMETF RDISDDMMVN EDKDETFDMH IQKVEAVLKD LTMTSEKSHS SDSLAKNTSA 101: NVDFSSQKTD DPVTDVRSDL SLRDSSRCEE NSYEDPFETN YETVELQNQH DVLLEELESG SSQLCSLESE LELLQMAAER LLDDKKPGGS YLEQLNQQLV 201: VKRCNIMDLK KQWDDVRLTL ETKKLLLLDQ LHVEEPEAKE KFHKLRKTEL DLQSLSSEIQ KREDERCNLY NELERQPKAA PRKSYIHGIK EITKNSRKLD 301: TDIQRISGET RELQLEKNSI QERLHRSYAV VDEMVTREVK KDPAVRQVYK LLTSIHSIFE QISEKILMTD RFRRETVDYE KKLGSITARG MSLEKLQADL 401: DAIRKENESL KK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)