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AT1G55670.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31975158 (2020): plastid
  • PMID:31932409 (2020): plastid
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:30962257 (2019): plastid
  • PMID:30865669 (2019): plastid
  • PMID:30135097 (2018): plastid
  • PMID:29967049 (2018): plastid
  • PMID:29104584 (2017): nucleus nuclear matrix nucleolus
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:25641898 (2015): plasma membrane
  • PMID:25402197 (2015): plastid plastid thylakoid plastid thylakoid membrane
  • PMID:24872594 (2014): plastid plastid thylakoid
  • PMID:24124904 (2013): plastid
  • PMID:23851315 (2013): plastid
  • PMID:23673981 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:23667806 (2013): plastid plastid thylakoid
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21531424 (2011): plastid
  • PMID:21311031 (2011): plastid
  • PMID:21311031 (2011): mitochondrion
  • PMID:20061580 (2010): plastid plastid thylakoid
  • PMID:19334764 (2009): plasma membrane
  • PMID:18633119 (2008): plastid plastid thylakoid
  • PMID:18431481 (2008): plastid plastid thylakoid
  • PMID:15322131 (2004): plastid
  • PMID:15028209 (2004): plastid
  • PMID:14729914 (2004): plastid
  • PMID:12938931 (2003): plastid
  • PMID:12766230 (2003): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : photosystem I subunit G
Curator
Summary (TAIR10)
Encodes subunit G of photosystem I, an 11-kDa membrane protein that plays an important role in electron transport between plastocyanin and PSI and is involved in the stability of the PSI complex. PSI-G subunit is bound to PSI-B and is in contact with Lhca1. The protein inserts into thylakoids by a direct or "spontaneous" pathway that does not involve the activities of any known chloroplast protein-targeting machinery. PSI-G appears to be directly or indirectly involved in the interaction between Photosystem I and plastocyanin.
Computational
Description (TAIR10)
photosystem I subunit G (PSAG); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthetic NADP+ reduction, photosystem I stabilization, protein stabilization, photosynthetic electron transport in photosystem I, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre, PsaG, plant (InterPro:IPR017494), Photosystem I PsaG/PsaK protein (InterPro:IPR000549), Photosystem I reaction centre, PsaG/PsaK, plant (InterPro:IPR016370); Has 117 Blast hits to 117 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT1G55670-MONOMERBioGrid:27241eggNOG:ENOG410IX4EeggNOG:ENOG41120CZ
EMBL:AC002328EMBL:AF324710EMBL:AF326870EMBL:AF339692
EMBL:AF378859EMBL:AJ245630EMBL:AY050463EMBL:CP002684
EMBL:Z37244EnsemblPlants:AT1G55670EnsemblPlants:AT1G55670.1entrez:842016
Gene3D:1.10.286.40GeneID:842016Genevisible:Q9S7N7GO:GO:0009507
GO:GO:0009534GO:GO:0009535GO:GO:0009579GO:GO:0009773
GO:GO:0009780GO:GO:0009941GO:GO:0015979GO:GO:0016021
GO:GO:0016168GO:GO:0030093GO:GO:0042550GO:GO:0050821
Gramene:AT1G55670.1hmmpanther:PTHR34195hmmpanther:PTHR34195:SF1HOGENOM:HOG000243205
InterPro:IPR000549InterPro:IPR016370InterPro:IPR017494InterPro:IPR023618
KEGG:ath:AT1G55670KO:K08905OMA:DVRAKEYPaxDb:Q9S7N7
Pfam:PF01241Pfam:Q9S7N7PhylomeDB:Q9S7N7PIRSF:PIRSF002912
PRIDE:Q9S7N7PRO:PR:Q9S7N7PROSITE:PS01026ProteinModelPortal:Q9S7N7
Proteomes:UP000006548RefSeq:NP_175963.1scanprosite:PS01026SMR:Q9S7N7
STRING:3702.AT1G55670.1TAIR:AT1G55670tair10-symbols:PSAGTCDB:5.B.4.1.1
TIGRfam:TIGR03051TIGRFAMs:TIGR03051TMHMM:TMhelixUniGene:At.16919
UniGene:At.21811UniGene:At.25349UniGene:At.71449UniProt:Q9S7N7
Coordinates (TAIR10) chr1:-:20802874..20803356
Molecular Weight (calculated) 17086.30 Da
IEP (calculated) 10.07
GRAVY (calculated) 0.02
Length 160 amino acids
Sequence (TAIR10)
(BLAST)
001: MATSASALLS PTTFSTAISH KNPNSISFHG LRPLRLGGSS SALPKLSTTG RKSSSAVVRA ELSPSIVISL STGLSLFLGR FVFFNFQREN VAKQGLPEQN
101: GKTHFEAGDD RAKEYVSLLK SNDPIGFNIV DVLAWGSIGH IVAYYILATS SNGYDPSFFG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)