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AT1G54570.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24872594 (2014): plastid
  • PMID:22274653 (2012): plastid plastid stroma plastoglobules
  • PMID:18431481 (2008): plastid plastid stroma
  • PMID:16461379 (2006): plastid plastid stroma plastoglobules
  • PMID:16414959 (2006): plastid plastid stroma plastoglobules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Esterase/lipase/thioesterase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 651 Blast hits to 637 proteins in 188 species: Archae - 0; Bacteria - 283; Metazoa - 139; Fungi - 19; Plants - 149; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink).
Protein Annotations
EC:2.3.1.-eggNOG:COG0204eggNOG:ENOG410IKHPEMBL:AC005388EMBL:AK118486EMBL:AY086491EMBL:BT005958
EMBL:CP002684EnsemblPlants:AT1G54570EnsemblPlants:AT1G54570.1entrez:841899ESTHER:arath-Y1457Gene3D:3.40.50.1820GeneID:841899
Genevisible:Q9ZVN2GO:GO:0004144GO:GO:0009507GO:GO:0010287GO:GO:0019432GO:GO:0033306Gramene:AT1G54570.1
hmmpanther:PTHR22753hmmpanther:PTHR22753:SF1HOGENOM:HOG000237853InParanoid:Q9ZVN2InterPro:IPR007130InterPro:IPR022742InterPro:IPR029058
KEGG:ath:AT1G54570OMA:MAMVNIEPaxDb:Q9ZVN2Pfam:PF03982Pfam:PF12146Pfam:Q9ZVN2PhylomeDB:Q9ZVN2
PIR:G96587PRIDE:Q9ZVN2PRO:PR:Q9ZVN2ProteinModelPortal:Q9ZVN2Proteomes:UP000006548RefSeq:NP_564662.1STRING:3702.AT1G54570.1
SUPFAM:SSF53474TAIR:AT1G54570UniGene:At.37193UniProt:Q9ZVN2
Coordinates (TAIR10) chr1:-:20380649..20384953
Molecular Weight (calculated) 78208.00 Da
IEP (calculated) 8.06
GRAVY (calculated) -0.16
Length 704 amino acids
Sequence (TAIR10)
(BLAST)
001: MATCSSSLLV LPNLRLSSNQ RRNFKVRAQI SGENKKATSL EPVNNNGSVS LSTTVQNQKG ANEVNGKGKS KRKIVSDEIE LLWDDGYGSK SVKDYFAAAK
101: EILKADGGPP RWFSPVDCGR PVEDAPTLLF LPGMDGTGMG LVPHHKALGK AFHVSCLHIP VLDRTPFEGL LKVVEDVLRQ EQATRPNKPI YLVGDSFGGC
201: LALAVAARNR SLDLVLILVN PATSFDRSPL QPLLPILEMV PEELHFTVPY ALSFIMGDPI KMATLGIDNQ LPTGVKIEKL RQRLTKTMLP LLSELGGIIP
301: RETLLWKLKL LRSGCAYANS RIHAVQAEVL VLASGKDMML PSQEEAKRLH GLLKNCSVRC FKDNGHTLLL EDSISLLTVI KGTGKYRRSW RYDLVSDFLP
401: PSKGELAYAL DEVLGFLRNA VGSVFFSTME DGKIVKGLAG VPDKGPVLLV GYHMLMGLEL GPMSEAFIKE KNILFRGMAH PVLYSDNDPA KAFDYGDWIK
501: VFGAYPVTAT NLFKLLDSKS HVLLFPGGAR EALHNRGEQY KLIWPEQQEF VRMAARFGAT IVPFGTVGED DIAELVLDYN DLMKIPILND YITEVTRDTK
601: QFKLREESEG EVANQPLYLP GLIPKVPGRF YYLFGKPIET KGRPELVKDK EEANQVYLEV KAEVENSIAY LLKKREEDPY RSVLDRLNYS LTHTTATHVP
701: SFEP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)