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AT1G54100.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : aldehyde dehydrogenase 7B4
Curator
Summary (TAIR10)
Aldehyde dehydrogenase
Computational
Description (TAIR10)
aldehyde dehydrogenase 7B4 (ALDH7B4); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 5F1 (TAIR:AT1G79440.1); Has 58805 Blast hits to 58641 proteins in 2995 species: Archae - 475; Bacteria - 35443; Metazoa - 2491; Fungi - 2112; Plants - 1217; Viruses - 0; Other Eukaryotes - 17067 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G54100-MONOMERBioCyc:ARA:GQT-790-MONOMERBioGrid:27074EC:1.2.1.3eggNOG:COG1012eggNOG:KOG2453EMBL:AC006577
EMBL:AF378873EMBL:AJ584645EMBL:AK230363EMBL:AY048242EMBL:AY091032EMBL:AY102145EMBL:AY117345
EMBL:CP002684EnsemblPlants:AT1G54100EnsemblPlants:AT1G54100.1EnsemblPlants:AT1G54100.2entrez:841849Gene3D:3.40.309.10Gene3D:3.40.605.10
GeneID:841849Genevisible:Q9SYG7GO:GO:0004029GO:GO:0005829GO:GO:0006081GO:GO:0009269GO:GO:0009651
GO:GO:0009737Gramene:AT1G54100.1Gramene:AT1G54100.2gramene_pathway:1.2.1.31gramene_pathway:LYSINE-DEG2-PWYhmmpanther:PTHR11699hmmpanther:PTHR11699:SF144
HOGENOM:HOG000271511InParanoid:Q9SYG7InterPro:IPR015590InterPro:IPR016161InterPro:IPR016162InterPro:IPR016163InterPro:IPR029510
KEGG:ath:AT1G54100KO:K14085ncoils:CoilOMA:EGYESGCPaxDb:Q9SYG7Pfam:PF00171Pfam:Q9SYG7
PhylomeDB:Q9SYG7PIR:H96581PRIDE:Q9SYG7PRO:PR:Q9SYG7PROSITE:PS00687ProteinModelPortal:Q9SYG7Proteomes:UP000006548
Reactome:R-ATH-71064RefSeq:NP_175812.1RefSeq:NP_849807.1scanprosite:PS00687SMR:Q9SYG7STRING:3702.AT1G54100.1SUPFAM:SSF53720
TAIR:AT1G54100tair10-symbols:ALDH7B4UniGene:At.20851UniProt:Q9SYG7
Coordinates (TAIR10) chr1:-:20195435..20198853
Molecular Weight (calculated) 54211.50 Da
IEP (calculated) 5.23
GRAVY (calculated) 0.05
Length 508 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSANNEYEF LSEIGLTSHN LGSYVAGKWQ ANGPLVSTLN PANNQPIAQV VEASLEDYEQ GLKACEEAAK IWMQVTAPKR GDIVRQIGDA LRSKLDYLGR
101: LLSLEMGKIL AEGIGEVQEV IDMCDFAVGL SRQLNGSVIP SERPNHMMLE MWNPLGIVGV ITAFNFPCAV LGWNACIALV CGNCVVWKGA PTTPLITIAM
201: TKLVAEVLEK NNLPGAIFTA MCGGAEIGEA IAKDTRIPLV SFTGSSRVGS MVQQTVNARS GKTLLELSGN NAIIVMDDAD IQLAARSVLF AAVGTAGQRC
301: TTCRRLLLHE SVYDKVLEQL LTSYKQVKIG NPLEKGTLLG PLHTPESKKN FEKGIEVIKS QGGKILTGGK AVEGEGNFVE PTIIEISADA AVVKEELFAP
401: VLYVLKFKSF GEAVAINNSV PQGLSSSIFT RNPENIFRWI GPLGSDCGIV NVNIPTNGAE IGGAFGGEKA TGGGREAGSD SWKQYMRRST CTINYGNELP
501: LAQGINFG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)