AT1G53710.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Calcineurin-like metallo-phosphoesterase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); Has 794 Blast hits to 778 proteins in 180 species: Archae - 3; Bacteria - 28; Metazoa - 240; Fungi - 249; Plants - 248; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:20053339..20056271 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 60034.30 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.53 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.18 | ||||||||||||||||||||||||||||||||||||||||
| Length | 528 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKHHHKLTVA LCLIWAATIL YGEMFAFWVP SLFTCSWPHH KSDGVESDGN FTKVAIVTDP QLMDKTSFRL SSKTLALELA QFYTDINMRR SFFRSVLPFK 101: PDVVLFLGDY FDGGPFLSEE EWQESLNRLK HVFGLNSEGR VGDIPTFYIP GNHDIGYSRV ASHKQGVIDR YEKVFGVRNR RFMIGNVEFI SIDAQAIDGN 201: SKKDLASEVW KFVQNVSTDA QSHPRVLLTH IPLYRPDQTP CGPHRGSSVI DQRFWRHSQD QEVIYQNYIT PESSTKLLEL IKPILVLSGH DHDQCTVIHK 301: SKAGSVTEHT LGTVSWQQGN IHPSFMLLSV PKAFHRNSSD PDKMLHTQLC FLPSQLFIYM WYLSLFVMSL LALLLWPNHG ISFLNNAADC ISNVMKSSFL 401: SSVTKEKNED ENCEYEMVWD AEGSMHLVKK ALQTPVKRQS DKPLVEKGNA VMRSAARKNA SEQIELVMDS DVNASAGGSD PLMRSASKSR TKLVIQRVIR 501: TIMMVIVIAA LNVPIYMMLL FKDWIEQE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)