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AT1G53510.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.662
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : mitogen-activated protein kinase 18
Curator
Summary (TAIR10)
member of MAP Kinase
Computational
Description (TAIR10)
mitogen-activated protein kinase 18 (MPK18); CONTAINS InterPro DOMAIN/s: MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 19 (TAIR:AT3G14720.1); Has 121070 Blast hits to 119835 proteins in 4221 species: Archae - 114; Bacteria - 13840; Metazoa - 44615; Fungi - 12415; Plants - 29396; Viruses - 569; Other Eukaryotes - 20121 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G53510-MONOMERBioGrid:27011EC:2.7.11.24eggNOG:ENOG410XNY0eggNOG:KOG0660EMBL:AC018748EMBL:AC024260
EMBL:AF360353EMBL:BT000870EMBL:CP002684EnsemblPlants:AT1G53510EnsemblPlants:AT1G53510.1entrez:841786GeneID:841786
Genevisible:Q9C5C0GO:GO:0000165GO:GO:0004707GO:GO:0005524GO:GO:0005737GO:GO:0043622Gramene:AT1G53510.1
hmmpanther:PTHR24055hmmpanther:PTHR24055:SF200HOGENOM:HOG000233024InParanoid:Q9C5C0IntAct:Q9C5C0InterPro:IPR000719InterPro:IPR003527
InterPro:IPR011009InterPro:IPR017441iPTMnet:Q9C5C0KEGG:ath:AT1G53510OMA:NTHMAIDPaxDb:Q9C5C0Pfam:PF00069
Pfam:Q9C5C0Pfscan:PS50011PIR:C96575PRIDE:Q9C5C0PRO:PR:Q9C5C0PROSITE:PS00107PROSITE:PS01351
PROSITE:PS50011ProteinModelPortal:Q9C5C0Proteomes:UP000006548RefSeq:NP_175756.2scanprosite:PS00107scanprosite:PS01351SMART:SM00220
SMR:Q9C5C0STRING:3702.AT1G53510.1SUPFAM:SSF56112TAIR:AT1G53510tair10-symbols:ATMPK18tair10-symbols:MPK18UniGene:At.25395
UniProt:Q9C5C0
Coordinates (TAIR10) chr1:-:19970961..19974158
Molecular Weight (calculated) 69355.70 Da
IEP (calculated) 9.59
GRAVY (calculated) -0.51
Length 615 amino acids
Sequence (TAIR10)
(BLAST)
001: MQQNQVKKGT KEMEFFTEYG DANRYRILEV IGKGSYGVVC AAIDTHTGEK VAIKKINDVF EHISDALRIL REVKLLRLLR HPDIVEIKSI MLPPSKREFK
101: DIYVVFELME SDLHQVIKAN DDLTREHHQF FLYQMLRALK FMHTANVYHR DLKPKNILAN ANCKLKVCDF GLARVAFNDT PTTVFWTDYV ATRWYRAPEL
201: CGSFFSKYTP AIDVWSIGCI FAEVLTGKPL FPGKSVVHQL ELITDLLGTP KSETISGVRN DKARKYLTEM RKKNPVTFSQ KFSKADPLAL RLLQRLLAFD
301: PKDRPTPAEA LADPYFKGLS KIEREPSSQQ ISKMEFEFER RRLTKDDIRE LIYREILEYH PQLLKDYMSG SEGSNFVYPS AIGHLRQQFT YLEENSSRNG
401: PVIPLERKHA SLPRSTVHST VVHSTSQPNL GATDSRRVSF EPSKNGASSA GHPSTSAYPT KSIGPPPRVP PSGRPGRVVE SSVSYENGRN LKEAYFRSAV
501: SSPHCYFRPN TMTNPENRNI EASSFPPKPQ NPVHQFSPTE PPAATTNQAD VETMNHPNPY FQPQLPKTDQ LNNNTHMAID AKLLQAQSQF GPAGAAAVAV
601: AAHRNIGTIS YSAAS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)