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AT1G53165.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.971
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ATMAP4K ALPHA1; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to salt stress, hyperosmotic response, response to wounding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G15220.1); Has 132200 Blast hits to 130116 proteins in 4312 species: Archae - 185; Bacteria - 15420; Metazoa - 49247; Fungi - 12380; Plants - 32481; Viruses - 583; Other Eukaryotes - 21904 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XP9GeggNOG:KOG0201EMBL:CP002684EnsemblPlants:AT1G53165EnsemblPlants:AT1G53165.1EnsemblPlants:AT1G53165.2entrez:841750
ExpressionAtlas:F4HPS0GeneID:841750GO:GO:0004672GO:GO:0005524Gramene:AT1G53165.1Gramene:AT1G53165.2hmmpanther:PTHR24361
hmmpanther:PTHR24361:SF25InterPro:IPR000719InterPro:IPR011009InterPro:IPR017441KEGG:ath:AT1G53165KO:K08838ncoils:Coil
Pfam:PF00069Pfscan:PS50011PROSITE:PS00107PROSITE:PS50011Proteomes:UP000006548Reactome:R-ATH-75153RefSeq:NP_001077708.1
RefSeq:NP_175724.2scanprosite:PS00107SMART:SM00220SMR:F4HPS0STRING:3702.AT1G53165.3SUPFAM:SSF56112TAIR:AT1G53165
tair10-symbols:ATMAP4K ALPHA1UniGene:At.21929UniProt:F4HPS0
Coordinates (TAIR10) chr1:+:19814386..19819233
Molecular Weight (calculated) 75451.30 Da
IEP (calculated) 7.02
GRAVY (calculated) -0.70
Length 680 amino acids
Sequence (TAIR10)
(BLAST)
001: MDDVAGLQEA AGTRFSQFEL IGRGSFGDVY KAFDTELNKD VAIKVIDLEE SEDEIEDIQK EISVLSQCRC PYITEYYGSY LHQTKLWIIM EYMAGGSVAD
101: LLQPGNPLDE ISIACITRDL LHAVEYLHAE GKIHRDIKAA NILLSENGDV KVADFGVSAQ LTRTISRRKT FVGTPFWMAP EVIQNSEGYN EKADIWSLGI
201: TMIEMAKGEP PLADLHPMRV LFIIPRESPP QLDEHFSRPL KEFVSFCLKK APAERPNAKE LLKHRFIKNA RKSPKLLERI RERPKYQVKE DEEIPTNGPK
301: APAESSGTVR VAKDERGQGT SGTSFQVKTV RNAGWDFSIG GSQGAGTVRA LKPPQARERR QEVNSNQTSQ KTSRTSGSQL SSTFGVPEIS EGGFNKRDSY
401: QNDYQEEDDS SGSGTVVIRS PRSSQSSSMF RDQSSGSTRY TSFDDASTSG TVVVRGQNDD SGSPRTPRSR LGLQERSSSA SEDSISNLAE AKLALEAGFR
501: RGNARERLGN GKVNKRREQA TDNSDYLRNS RDHSDKQRPV MRSQQVSDDE EDDSKLASLS ASLSLLLLPS LKEAVGGDDS KGTIGHRVSR SLVKMEREKP
601: GSSEAFIAKL IEQLGSTKEV SVKEVQDMAI RVFAKTMNND AENKRKQASK EFSSNANFSP LARFLFSRWL GQTSRDLNQS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)