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AT1G53030.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cytochrome C oxidase copper chaperone (COX17)
Curator
Summary (TAIR10)
encodes a copper chaperone, can functional complements the yeast COX17 null mutant. May play a role in the delivery of copper to mitochondria. Expressed in roots and thus may also play a role in copper transport in the roots.
Computational
Description (TAIR10)
Cytochrome C oxidase copper chaperone (COX17); FUNCTIONS IN: copper chaperone activity; INVOLVED IN: copper ion transport; LOCATED IN: mitochondrial intermembrane space; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase copper chaperone (InterPro:IPR007745); BEST Arabidopsis thaliana protein match is: cytochrome c oxidase 17 (TAIR:AT3G15352.1); Has 264 Blast hits to 264 proteins in 116 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 23; Plants - 55; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XVYQeggNOG:KOG3496EMBL:AC022520EMBL:AF349685EMBL:AY084685EMBL:BT024519EMBL:CP002684
EnsemblPlants:AT1G53030EnsemblPlants:AT1G53030.1entrez:841736GeneID:841736Genevisible:Q94FT1GO:GO:0005758GO:GO:0006825
GO:GO:0016531Gramene:AT1G53030.1hmmpanther:PTHR16719hmmpanther:PTHR16719:SF2HOGENOM:HOG000195037InParanoid:Q94FT1InterPro:IPR007745
InterPro:IPR009069KEGG:ath:AT1G53030KO:K02260OMA:QAQDSACPANTHER:PTHR16719PaxDb:Q94FT1Pfam:PF05051
Pfam:Q94FT1PhylomeDB:Q94FT1PRIDE:Q94FT1PRO:PR:Q94FT1ProDom:PD014904ProteinModelPortal:Q94FT1Proteomes:UP000006548
RefSeq:NP_175711.1SMR:Q94FT1STRING:3702.AT1G53030.1SUPFAM:SSF47072TAIR:AT1G53030UniGene:At.26161UniProt:Q94FT1
Coordinates (TAIR10) chr1:-:19760224..19760442
Molecular Weight (calculated) 7938.60 Da
IEP (calculated) 7.72
GRAVY (calculated) -0.39
Length 72 amino acids
Sequence (TAIR10)
(BLAST)
1: MSGLQAQDSA CSLDKPSKDV VATETKPKKR ICCACPDTKK LRDECIVEHG ESACTKWIEA HILCLRSEGF KV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)