AT1G52320.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT5G25590.1); Has 517 Blast hits to 513 proteins in 62 species: Archae - 6; Bacteria - 6; Metazoa - 50; Fungi - 2; Plants - 427; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:19485399..19487204 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54954.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.19 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.79 | ||||||||||||||||||||||||||||||||
| Length | 472 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKKSKGIGIP GERRGMRMPV TATHLANVFI ELDDNFLKAS ESAHDVSKML EATRLHYHSN FADNRGHIDH SARVMRVITW NRSFRGIPNA DDGKDDVDLE 101: ENETHATVLD KLLAWEKKLY DEVKAGELMK IEYQKKVAHL NRVKKRGGHS DSLERAKAAV SHLHTRYIVD MQSMDSTVSE INRLRDEQLY LKLVHLVEAM 201: GKMWEMMQIH HQRQAEISKV LRSLDVSQAV KETNDHHHER TIQLLAVVQE WHTQFCRMID HQKEYIKALG GWLKLNLIPI ESTLKEKVSS PPRVPNPAIQ 301: KLLHAWYDRL DKIPDEMAKS AIINFAAVVS TIMQQQEDEI SLRNKCEETR KELGRKIRQF EDWYHKYIQK RGPEGMNPDE ADNDHNDEVA VRQFNVEQIK 401: KRLEEEEEAY HRQSHQVREK SLASLRTRLP ELFQAMSEVA YSCSDMYRAI TYASKRQSQS ERHQKPSQGQ SS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)