AT1G51910.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51860.1); Has 119905 Blast hits to 113754 proteins in 4176 species: Archae - 97; Bacteria - 12538; Metazoa - 41671; Fungi - 9653; Plants - 39014; Viruses - 350; Other Eukaryotes - 16582 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:19284277..19288385 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 98683.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.52 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 876 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKTMNGFLLL STIAFAVFHL VQAQSQSGFI SLDCGLIPKD TTYTEQITNI TYISDADYID SGLTERISDS YKSQLQQQTW TLRSFPEGQR NCYNFNLKAN 101: LKYLIRGTFV YGNYDGLNQM PKFDLHIGPN KWTSVILEGV ANATIFEIIH VLTQDRLQVC LVKTGQTTPF ISSLELRPLN NDTYVTQGGS LMSFARIYFP 201: KTAYFLRYSD DLYDRVWVPF SQNETVSLST NLPVDTSSNS YNVPQNVANS AIIPAEATHP LNIWWDLQNI NAPSYVYMHF AEIQNLKAND IREFNITYNG 301: GQVWESSIRP HNLSITTISS PTALNSSDGF FNFTFTMTTT STLPPLINAL EVYTLVENLL LETYQDEVSA MMNIKKTYGL SKKISWQGDP CSPQIYRWEG 401: LNCLYLDSDQ PLITSLNLRT SGLTGIITHD ISNLIQLREL DLSDNDLSGE IPDFLADMKM LTLVNLKGNP KLNLTVPDSI KHRINNKSLK LIIDENQSSE 501: KHGIKFPLVA ILASVAGVIA LLAIFTICVI FKREKQGSGE APTRVNTEIR SSYQSIETKD RKFTYSEILK MTNNFERVLG KGGYGRVYYG KLDDTEVAVK 601: MLFHSSAEQD YKHFKAEVEL LLRVHHRHLV GLVGYCDDGD NFALIYEYMA NGDLKENMSG NRSGHVLSWE NRMQIAMEAA QGLEYLHNGS RPPMVHRDVK 701: TTNILLNELY QAKLADFGLS RSSPVDGESY VSTIVAGTPG YLDPETNLLS EKTDVYSFGV VLLEIITNQP VIDTTREKAH ITDWVGFKLM EGDIRNIIDP 801: KLIKEFDTNG VWKAVELALS CVNPTSNHRP TMPHVVMELK ECLDSEIARK QGSQDMFSRD SIELTFSPTG FSPGPR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)