AT1G51850.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51820.1); Has 171252 Blast hits to 122960 proteins in 4539 species: Archae - 111; Bacteria - 14101; Metazoa - 44553; Fungi - 9964; Plants - 82714; Viruses - 410; Other Eukaryotes - 19399 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:19252964..19256783 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 96125.90 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.12 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.22 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 865 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MERHCVLVAT FLLMLHIVHA QDQIGFISVD CGLAPRESPY NEAKTGLTYT SDDGLVNVGK PGRIAKEFEP LADKPTLTLR YFPEGVRNCY NLNVTSDTNY 101: LIKATFVYGN YDGLNVGPNF DLYFGPNLWT TVCLIKTGIS IPFINVLELR PMKKNMYVTQ GESLNYLFRV YISNSSTRIR FPDDVYDRKW YPYFDNSWTQ 201: VTTTLDVNTS LTYELPQSVM AKAATPIKAN DTLNITWTVE PPTTKFYSYM HFAELQTLRA NDAREFNVTM NGIYTYGPYS PKPLKTETIY DKIPEQCDGG 301: ACLLQVVKTL KSTLPPLLNA IEAFTVIDFP QMETNGDDVD AIKNVQDTYG ISRISWQGDP CVPKLFLWDG LNCNNSDNST SPIITSLDLS SSGLTGSITQ 401: AIQNLTNLQE LDLSDNNLTG EIPDFLGDIK SLLVINLSGN NLSGSVPPSL LQKKGMKLNV EGNPHLLCTA DSCVKKGEDG HKKKSVIVPV VASIASIAVL 501: IGALVLFFIL RKKKSPKVEG PPPSYMQASD GRSPRSSEPA IVTKNRRFTY SQVAIMTNNF QRILGKGGFG MVYHGFVNGT EQVAVKILSH SSSQGYKEFK 601: AEVELLLRVH HKNLVGLVGY CDEGENMALI YEYMANGDLK EHMSGTRNRF TLNWGTRLKI VVESAQGLEY LHNGCKPPMV HRDVKTTNIL LNEHFQAKLA 701: DFGLSRSFPI EGETHVSTVV AGTPGYLDPE YYKTNWLTEK SDVYSFGIVL LELITNRPVI DKSREKPHIA EWVGVMLTKG DINSIMDPNL NEDYDSGSVW 801: KAVELAMSCL NPSSARRPTM SQVVIELNEC IASENSRGGA SRDMDSKSSI EVSLTFDTEL SPTAR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)