AT1G51830.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51850.1); Has 158754 Blast hits to 122221 proteins in 4579 species: Archae - 99; Bacteria - 13782; Metazoa - 44461; Fungi - 10048; Plants - 71392; Viruses - 389; Other Eukaryotes - 18583 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:19243025..19246010 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 76636.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.39 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 693 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTVFFINDCV RFPDDVYDRK WYPIFQNSWT QVTTNLNVNI STIYELPQSV MSTAATPLNA NATLNITWTI EPPTTPFYSY IHFAELQSLR ANDTREFNVT 101: LNGEYTIGPY SPKPLKTETI QDLSPEQCNG GACILQLVET LKSTLPPLLN AIEAFTVIDF PQMETNEDDV TGINDVQNTY GLNRISWQGD PCVPKQYSWD 201: GLNCNNSDIS IPPIIISLDL SSSGLNGVIT QGIQNLTHLQ YLDLSDNNLT GDIPKFLADI QSLLVINLSG NNLTGSVPLS LLQKKGLKLN VEGNPHLLCT 301: DGLCVNKGDG HKKKSIIAPV VASIASIAIL IGALVLFFVL KKKTQSKGPP AAYVQASNGR SRRSAEPAIV TKNKRFTYSE VMQMTNNFQR VLGKGGFGIV 401: YHGLVNGTEQ VAIKILSHSS SQGYKQFKAE VELLLRVHHK NLVGLVGYCD EGENLALIYE YMANGDLKEH MSGTRNHFIL NWGTRLKIVV ESAQGLEYLH 501: NGCKPLMVHR DIKTTNILLN EQFDAKLADF GLSRSFPIEG ETHVSTAVAG TPGYLDPEYY RTNWLTEKSD VYSFGVVLLE IITNQPVIDP RREKPHIAEW 601: VGEVLTKGDI KNIMDPSLNG DYDSTSVWKA VELAMCCLNP SSARRPNMSQ VVIELNECLT SENSRGGAIR DMDSEGSIEV SLTFGTEVTP LAR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)