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AT1G51820.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51850.1); Has 160279 Blast hits to 119957 proteins in 4419 species: Archae - 101; Bacteria - 13381; Metazoa - 43768; Fungi - 9630; Plants - 74708; Viruses - 404; Other Eukaryotes - 18287 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G51820-MONOMERBioGrid:26834EC:2.7.11.1eggNOG:COG0515
eggNOG:ENOG410J721EMBL:AC015448EMBL:AC025294EMBL:CP002684
EMBL:FJ708652EnsemblPlants:AT1G51820EnsemblPlants:AT1G51820.1entrez:841609
Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:841609Genevisible:C0LGG3
GO:GO:0004674GO:GO:0005524GO:GO:0016021Gramene:AT1G51820.1
hmmpanther:PTHR27003hmmpanther:PTHR27003:SF44HOGENOM:HOG000116550InParanoid:C0LGG3
InterPro:IPR000719InterPro:IPR001611InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013320InterPro:IPR017441InterPro:IPR024788InterPro:IPR032675
KEGG:ath:AT1G51820OMA:WNYNAYAPaxDb:C0LGG3Pfam:C0LGG3
Pfam:PF00069Pfam:PF12819Pfam:PF13855Pfscan:PS50011
PhylomeDB:C0LGG3PIR:E96557PRIDE:C0LGG3PRO:PR:C0LGG3
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:C0LGG3
Proteomes:UP000006548RefSeq:NP_175594.2scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:C0LGG3STRING:3702.AT1G51820.1SUPFAM:SSF52058
SUPFAM:SSF56112TAIR:AT1G51820TMHMM:TMhelixUniGene:At.52141
UniProt:C0LGG3
Coordinates (TAIR10) chr1:-:19237407..19241883
Molecular Weight (calculated) 98103.80 Da
IEP (calculated) 6.92
GRAVY (calculated) -0.14
Length 885 amino acids
Sequence (TAIR10)
(BLAST)
001: MERHFVFIAT YLLIFHLVQA QNQTGFISVD CGLSLLESPY DAPQTGLTYT SDADLVASGK TGRLAKEFEP LVDKPTLTLR YFPEGVRNCY NLNVTSDTNY
101: LIKATFVYGN YDGLNVGPNF NLYLGPNLWT TVSSNDTIEE IILVTRSNSL QVCLVKTGIS IPFINMLELR PMKKNMYVTQ SGSLKYLFRG YISNSSTRIR
201: FPDDVYDRKW YPLFDDSWTQ VTTNLKVNTS ITYELPQSVM AKAATPIKAN DTLNITWTVE PPTTQFYSYV HIAEIQALRA NETREFNVTL NGEYTFGPFS
301: PIPLKTASIV DLSPGQCDGG RCILQVVKTL KSTLPPLLNA IEAFTVIDFP QMETNENDVA GIKNVQGTYG LSRISWQGDP CVPKQLLWDG LNCKNSDIST
401: PPIITSLDLS SSGLTGIITQ AIKNLTHLQI LDLSDNNLTG EVPEFLADIK SLLVINLSGN NLSGSVPPSL LQKKGMKLNV EGNPHILCTT GSCVKKKEDG
501: HKKKSVIVPV VASIASIAVL IGALVLFLIL RKKRSPKVEG PPPSYMQASD GRLPRSSEPA IVTKNRRFSY SQVVIMTNNF QRILGKGGFG MVYHGFVNGT
601: EQVAVKILSH SSSQGYKQFK AEVELLLRVH HKNLVGLVGY CDEGDNLALI YEYMANGDLK EHMSGTRNRF ILNWGTRLKI VIESAQGLEY LHNGCKPPMV
701: HRDVKTTNIL LNEHFEAKLA DFGLSRSFLI EGETHVSTVV AGTPGYLDPE YHRTNWLTEK SDVYSFGILL LEIITNRHVI DQSREKPHIG EWVGVMLTKG
801: DIQSIMDPSL NEDYDSGSVW KAVELAMSCL NHSSARRPTM SQVVIELNEC LASENARGGA SRDMESKSSI EVSLTFGTEV SPNAR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)