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AT1G51805.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:25641898 (2015): plasma membrane
  • PMID:23990937 (2013): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:18686298 (2008): plant-type vacuole plant-type vacuole membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51820.1); Has 156064 Blast hits to 121335 proteins in 4638 species: Archae - 107; Bacteria - 13787; Metazoa - 43955; Fungi - 9896; Plants - 69433; Viruses - 409; Other Eukaryotes - 18477 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:ENOG410IF1SEMBL:CP002684EnsemblPlants:AT1G51805EnsemblPlants:AT1G51805.1entrez:841607ExpressionAtlas:F4IB63
Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:841607GO:GO:0004674GO:GO:0005524GO:GO:0016021Gramene:AT1G51805.1
hmmpanther:PTHR27003hmmpanther:PTHR27003:SF44InParanoid:F4IB63InterPro:IPR000719InterPro:IPR001611InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013320InterPro:IPR017441InterPro:IPR024788InterPro:IPR032675iPTMnet:F4IB63OMA:ETLNITWPaxDb:F4IB63
Pfam:PF00069Pfam:PF12819Pfam:PF13855Pfscan:PS50011PRIDE:F4IB63PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:F4IB63Proteomes:UP000006548RefSeq:NP_175592.2scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:F4IB63STRING:3702.AT1G51805.1SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT1G51805TMHMM:TMhelixUniGene:At.22048
UniProt:F4IB63
Coordinates (TAIR10) chr1:-:19221187..19225590
Molecular Weight (calculated) 98081.20 Da
IEP (calculated) 5.29
GRAVY (calculated) -0.17
Length 884 amino acids
Sequence (TAIR10)
(BLAST)
001: MESHRVFVAT FMLILHLVQA QDQPGFINVD CGLLPRDSPY NALGTGLVYT SDVGLVSSGK TGKIAKEFEE NNSTPNLTLR YFPDGARNCY NLNVSRDTNY
101: MIKATFVYGN YDGHKDEPNF DLYLGPNLWA TVSRSETVEE IIHVTKSDSL QVCLAKTGDF IPFINILELR PLKKNVYVTE SGSLKLLFRK YFSDSGQTIR
201: YPDDIYDRVW HASFLENNWA QVSTTLGVNV TDNYDLSQDV MATGATPLND SETLNITWNV EPPTTKVYSY MHFAELETLR ANDTREFNVM LNGNDLFGPY
301: SPIPLKTETE TNLKPEECED GACILQLVKT SKSTLPPLLN AIEAFTVIDF LQVETDEDDA AAIKNVQNAY GLINRSSWQG DPCVPKQYSW DGLKCSYSDS
401: TPPIINFLDL SASGLTGIIA PAIQNLTHLE ILALSNNNLT GEVPEFLADL KSIMVIDLRG NNLSGPVPAS LLQKKGLMLH LDDNPHILCT TGSCMHKGEG
501: EKKSIIVPVV ASIVSLAVII GALILFLVFR KKKASKVEGT LPSYMQASDG RSPRSSEPAI VTKNKRFTYS QVVIMTNNFQ RILGKGGFGI VYHGFVNGVE
601: QVAVKILSHS SSQGYKQFKA EVELLLRVHH KNLVGLVGYC DEGENMALIY EYMANGDLKE HMSGTRNRFI LNWETRLKIV IDSAQGLEYL HNGCKPLMVH
701: RDVKTTNILL NEHFEAKLAD FGLSRSFPIG GETHVSTVVA GTPGYLDPEY YKTNRLTEKS DVYSFGIVLL EMITNRPVID QSREKPYISE WVGIMLTKGD
801: IISIMDPSLN GDYDSGSVWK AVELAMSCLN PSSTRRPTMS QVLIALNECL VSENSRGGAS RDMDSKSSLE VSLTFDTDVS PMAR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)