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AT1G51610.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cation efflux family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cation efflux family protein; FUNCTIONS IN: cation transmembrane transporter activity, efflux transmembrane transporter activity; INVOLVED IN: cation transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); Has 3094 Blast hits to 3092 proteins in 1095 species: Archae - 127; Bacteria - 2543; Metazoa - 129; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 250 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0053eggNOG:KOG2802EMBL:AC024261EMBL:AC025294EMBL:AY050856EMBL:AY150383EMBL:CP002684
EnsemblPlants:AT1G51610EnsemblPlants:AT1G51610.1entrez:841586Gene3D:1.20.1510.10GeneID:841586Genevisible:Q8H1G3GO:GO:0005774
GO:GO:0008324GO:GO:0016021Gramene:AT1G51610.1hmmpanther:PTHR13414HOGENOM:HOG000242618InParanoid:Q8H1G3InterPro:IPR002524
InterPro:IPR027469KEGG:ath:AT1G51610KO:K14696OMA:IEAHNPIPaxDb:Q8H1G3Pfam:PF01545Pfam:Q8H1G3
PhylomeDB:Q8H1G3PIR:G96554PRIDE:Q8H1G3PRO:PR:Q8H1G3ProteinModelPortal:Q8H1G3Proteomes:UP000006548RefSeq:NP_564594.1
STRING:3702.AT1G51610.1SUPFAM:0054606TAIR:AT1G51610TIGRfam:TIGR01297TIGRFAMs:TIGR01297TMHMM:TMhelixUniGene:At.18277
UniProt:Q8H1G3
Coordinates (TAIR10) chr1:+:19136625..19139621
Molecular Weight (calculated) 50107.10 Da
IEP (calculated) 7.70
GRAVY (calculated) -0.01
Length 457 amino acids
Sequence (TAIR10)
(BLAST)
001: MQSSHRILSR LLHSPRKGYI RASVGGSVHF LALFDEKDNG FVDTTHRSFS SLIRSSSHVR GLISTNCLNK GLGVRCSVSL DRETPLIDTY SSHRNFFTRA
101: KQVKRIEIND QHSQRAVTTA LWCNFLVFSL KFGVWWTSSS HVIMAEVVHS VADFANQALL AYGLSSSRRA PDALHPYGYS KERFVWSLIS AVGIFCLGSG
201: ATIVNGVQNL WTSSPPPNME LAAVVIGGSF LIEGASLLVA IQSVKKGAAQ EGMTIRDYIW RGHDPTSVAV MTEDGAAVAG LAIAAASLVA VRMTGNPIYD
301: PIGSIVVGNL LGMVAIFLIQ RNRHALIGRA MDDQDMSKVL KFLRNDSVVD SLYDCKSEVI GPGSFRFKAE IDFNGQMVVQ NYLKRTGREE WAKMFREAAK
401: NGDDSAMLNI MSNYGEEVVT ALGSEVDRLE KEIQELVPGI QHVDIEAHNP TPTDPSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)