AT1G51410.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.296 plasma membrane 0.210 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NAD(P)-binding Rossmann-fold superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity; INVOLVED IN: cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G19440.1); Has 8402 Blast hits to 8385 proteins in 1446 species: Archae - 75; Bacteria - 2860; Metazoa - 268; Fungi - 933; Plants - 2492; Viruses - 10; Other Eukaryotes - 1764 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:19059885..19061424 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35920.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.12 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.08 | ||||||||||||||||||||||||||||||||||||
| Length | 325 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSEEEKTVC VTGASGYIAS WIVKLLLLRG YTVKASVRDP NDPRKTEHLL ALEGAEERLK LFKANLLEEG SFDSAIDGCE GVFHTASPFY HDVKDPQAEL 101: LDPAVKGTIN VLSSCLKTSS VKRVVLTSSI AAVAFNGMPR TPETIVDETW FADPDYCRAS KLWYVLSKTL AENAAWKFAK ENNLQLVSIN PAMVIGPLLQ 201: PTLNTSAAAV LSLIKGAQTF PNATFGWVNV KDVANAHIQA FENPDADGRY CLVERVAHYS EVVNILHDLY PDFQLPEKCA DEKIYIPTYK VSKEKAESLG 301: VEFVPLEVSI KETVESLRDK GFIRF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)