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AT1G51080.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 11 growth stages; Has 101 Blast hits to 98 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 10; Plants - 27; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IYHPeggNOG:ENOG410YR78EMBL:AC079828EMBL:AK175457EMBL:BT010434EMBL:CP002684EnsemblPlants:AT1G51080
EnsemblPlants:AT1G51080.1entrez:841530GeneID:841530GO:GO:0009536Gramene:AT1G51080.1hmmpanther:PTHR38357hmmpanther:PTHR38357:SF1
HOGENOM:HOG000152172InterPro:IPR024530KEGG:ath:AT1G51080OMA:DNEDKIGPfam:PF12843PhylomeDB:Q9C683PIR:A96548
Proteomes:UP000006548RefSeq:NP_175519.1STRING:3702.AT1G51080.1TAIR:AT1G51080UniGene:At.17182UniGene:At.37898UniProt:Q9C683
Coordinates (TAIR10) chr1:-:18929883..18930740
Molecular Weight (calculated) 33093.50 Da
IEP (calculated) 10.49
GRAVY (calculated) -0.91
Length 285 amino acids
Sequence (TAIR10)
(BLAST)
001: MSFSVVLFHS PHSAAVTTKT IFRISSSSSF RPRRNLSSSN GIFSTNQSKP LIKKLQIIET LAARDTIIDF GKHKGKMLGT LPSSYLKWVS KNLRAGVFEY
101: WAKLADEVLE DDVYKDRTEW EFAEKILHGS DESMRALTSV RKSREEVNSV SMLLEISERF GWDNEDKIGW SKINFELLGT SKGGRIPRLR KANEEEEERG
201: EMVRRREIKK KEEEEDENGW RRKQRRERMR QSLGRDDGKT VNRSEQKGVL GKLEDVEKQL EPKIQSPFPG RESLLKKVMN KRRSQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)