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AT1G50580.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.660
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : UDP-Glycosyltransferase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G29630.1); Has 5113 Blast hits to 5079 proteins in 305 species: Archae - 0; Bacteria - 165; Metazoa - 326; Fungi - 12; Plants - 4590; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G50580-MONOMERCAZy:GT1EC:2.4.1.-eggNOG:COG1819eggNOG:KOG1192EMBL:AC012561EMBL:AC079279
EMBL:CP002684EnsemblPlants:AT1G50580EnsemblPlants:AT1G50580.1entrez:841480ExpressionAtlas:Q9LPS8GeneID:841480Genevisible:Q9LPS8
GO:GO:0016758Gramene:AT1G50580.1gramene_pathway:2.4.1.91gramene_pathway:PWY-5321hmmpanther:PTHR11926hmmpanther:PTHR11926:SF326HOGENOM:HOG000237566
InParanoid:Q9LPS8InterPro:IPR002213KEGG:ath:AT1G50580OMA:REDSGWFPANTHER:PTHR11926PaxDb:Q9LPS8Pfam:PF00201
Pfam:Q9LPS8PhylomeDB:Q9LPS8PIR:C96542PRIDE:Q9LPS8PRO:PR:Q9LPS8ProteinModelPortal:Q9LPS8Proteomes:UP000006548
RefSeq:NP_175473.1SMR:Q9LPS8SUPFAM:SSF53756TAIR:AT1G50580UniGene:At.51192UniProt:Q9LPS8UniProt:W8QP73
Coordinates (TAIR10) chr1:+:18730831..18732177
Molecular Weight (calculated) 50467.50 Da
IEP (calculated) 6.20
GRAVY (calculated) -0.02
Length 448 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSKFHAFMY PWFGFGHMIP YLHLANKLAE KGHRVTFFLP KKAHKQLQPL NLFPDSIVFE PLTLPPVDGL PFGAETASDL PNSTKKPIFV AMDLLRDQIE
101: AKVRALKPDL IFFDFVHWVP EMAEEFGIKS VNYQIISAAC VAMVLAPRAE LGFPPPDYPL SKVALRGHEA NVCSLFANSH ELFGLITKGL KNCDVVSIRT
201: CVELEGKLCG FIEKECQKKL LLTGPMLPEP QNKSGKFLED RWNHWLNGFE PGSVVFCAFG TQFFFEKDQF QEFCLGMELM GLPFLISVMP PKGSPTVQEA
301: LPKGFEERVK KHGIVWEGWL EQPLILSHPS VGCFVNHCGF GSMWESLVSD CQIVFIPQLA DQVLITRLLT EELEVSVKVQ REDSGWFSKE DLRDTVKSVM
401: DIDSEIGNLV KRNHKKLKET LVSPGLLSGY ADKFVEALEI EVNNTKFS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)