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AT1G50460.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Predictors External Curations
AmiGO : mitochondrion 12953116
AmiGO : mitochondrion 14671022
AmiGO : mitochondrion 16618929
AmiGO : mitochondrion 18481082
AmiGO : plastid 16618929
SwissProt : mitochondrion 16381842
TAIR : plastid 16618929
TAIR : mitochondrion 16618929
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:22923678 (2012): mitochondrion
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21841088 (2011): mitochondrion
  • PMID:16618929 (2006): unclear
  • PMID:14671022 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : hexokinase-like 1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
hexokinase-like 1 (HKL1); FUNCTIONS IN: hexokinase activity, ATP binding; INVOLVED IN: response to salt stress, response to cold, response to osmotic stress; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: Hexokinase (TAIR:AT3G20040.1); Has 2396 Blast hits to 2128 proteins in 324 species: Archae - 0; Bacteria - 92; Metazoa - 1286; Fungi - 598; Plants - 287; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G50460-MONOMERBioGrid:26693EC:2.7.1.1eggNOG:COG5026eggNOG:KOG1369EMBL:AC012561EMBL:AY074314
EMBL:AY096416EMBL:CP002684EnsemblPlants:AT1G50460EnsemblPlants:AT1G50460.1entrez:841468GeneID:841468Genevisible:Q9LPS1
GO:GO:0001678GO:GO:0005524GO:GO:0005536GO:GO:0005739GO:GO:0005829GO:GO:0006096GO:GO:0006970
GO:GO:0009409GO:GO:0009536GO:GO:0009651GO:GO:0019158GO:GO:0031307GO:GO:0080147Gramene:AT1G50460.1
gramene_pathway:2.7.1.2gramene_pathway:2.7.1.4gramene_pathway:PWY-5661gramene_pathway:PWY-621gramene_pathway:PWY0-1182gramene_plant_reactome:1119601gramene_plant_reactome:1119628
gramene_plant_reactome:6876242gramene_plant_reactome:6876606hmmpanther:PTHR19443hmmpanther:PTHR19443:SF6HOGENOM:HOG000162670InParanoid:Q9LPS1InterPro:IPR001312
InterPro:IPR022672InterPro:IPR022673KEGG:00010+2.7.1.1KEGG:00051+2.7.1.1KEGG:00052+2.7.1.1KEGG:00500+2.7.1.1KEGG:00520+2.7.1.1
KEGG:00521+2.7.1.1KEGG:00524+2.7.1.1KEGG:ath:AT1G50460KO:K00844MINT:MINT-8059306OMA:RTRNTFPPANTHER:PTHR19443
PaxDb:Q9LPS1Pfam:PF00349Pfam:PF03727Pfam:Q9LPS1Pfscan:PS51257Pfscan:PS51748PhylomeDB:Q9LPS1
PIR:A96541PRIDE:Q9LPS1PRO:PR:Q9LPS1PROSITE:PS51748ProteinModelPortal:Q9LPS1Proteomes:UP000006548Reactome:R-ATH-170822
Reactome:R-ATH-70153Reactome:R-ATH-70171RefSeq:NP_175463.1SMR:Q9LPS1STRING:3702.AT1G50460.1SUPFAM:SSF53067TAIR:AT1G50460
tair10-symbols:ATHKL1tair10-symbols:HKL1TMHMM:TMhelixUniGene:At.27557UniProt:Q9LPS1
Coordinates (TAIR10) chr1:+:18694031..18697429
Molecular Weight (calculated) 54594.00 Da
IEP (calculated) 5.54
GRAVY (calculated) 0.03
Length 498 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKVAVAFAA VAVVAACSVA AVMVGRRMKS RRKWRTVVEI LKELEDDCDT PVGRLRQVVD AMAVEMHAGL ASEGGSKLKM LLTFVDDLPT GREKGTYYAL
101: HLGGTYFRIL RVLLGDQRSY LDVQDVERHP IPSHLMNSTS EVLFNFLAFS LERFIEKEEN GSDSQGVRRE LAFTFSFPVK HTSISSGVLI KWTKGFEISE
201: MVGQDIAECL QGALNRRGLD MHVAALVNDT VGALSLGYYH DPDTVVAVVF GTGSNACYLE RTDAIIKCQG LLTTSGSMVV NMEWGNFWSS HLPRTSYDID
301: LDAESSNAND MGFEKMISGM YLGDIVRRVI LRMSEDSDIF GPISPVLSEP YVLRTNSVSA IHEDDTPELQ EVARILKDIG VSDVPLKVRK LVVKICDVVT
401: RRAGRLAAAG IAGILKKIGR DGSGGITSGR SRSEIQMQKR TVVAVEGGLY MNYTMFREYM EEALVEILGE EVSQYVVVKA MEDGSSIGSA LLVASLQS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)