AT1G49730.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G19300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:18402618..18405638 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 76447.60 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.10 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.11 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 693 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSYSHRDLPL NSFFIISFSL LSFSLWLLLA MVVNSQAFLL ALIALLATQL PSLMAADCPL DFSGSNFTLV ATVCSNITNR GKCCRYMNAF VAVSVARYAN 101: LSTNLGVTSD LSETCIASIS RAMEGYGVSR NATSFCGLGT KILVKYDCDG RTTVTQMHQS PGFGHVSRNC RLPFSPGHQC RKCLNSGITY LRNLIGAETN 201: NITLCTCRDA TYATLASRID DTSALELLSC FFQVTELNIP SESFSPVASP EPSPSTVGGI SPSNSDSQMT TSRSTNPYHL TMVPTIGIVV TAVALTMLVV 301: LVILIRRKNR ELDESESLDR KSTKSVPSSL PVFKIHEDDS SSAFRKFSYK EMTNATNDFN TVIGQGGFGT VYKAEFNDGL IAAVKKMNKV SEQAEQDFCR 401: EIGLLAKLHH RNLVALKGFC INKKERFLVY DYMKNGSLKD HLHAIGKPPP SWGTRMKIAI DVANALEYLH FYCDPPLCHR DIKSSNILLD ENFVAKLSDF 501: GLAHSSRDGS VCFEPVNTDI RGTPGYVDPE YVVTQELTEK SDVYSYGVVL LELITGRRAV DEGRNLVEMS QRFLLAKSKH LELVDPRIKD SINDAGGKQL 601: DAVVTVVRLC TEKEGRSRPS IKQVLRLLCE SCDPVHSAFA KAVEEEIGWD SRKRSNLRIQ RGDSRIFGPS SSTTSRSHYS RSLPHSPING FSF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)