AT1G49650.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 5 (TAIR:AT1G49660.1); Has 9107 Blast hits to 9083 proteins in 1488 species: Archae - 111; Bacteria - 5471; Metazoa - 421; Fungi - 765; Plants - 1374; Viruses - 3; Other Eukaryotes - 962 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:18377363..18378487 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 41695.30 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.99 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.30 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 374 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLRRITCSSS LASPSLFLRF FRQLPRSYSS PTTIAVSGRN IRRLSTPTTL RCICSHSSSE IISEHPPFVR VYKDGRIERL SGTETVPASL NPRNDVVSKD 101: VVYSPGHNLS VRLFLPHKST QLAAGNKLPL LIYFHGGAWI NESPFSPIYH NFLTEVVKSA NCLAVSVQYR RAPEDPVPAA YEDTWSAIQW IFSHSCGSGE 201: EDWINKYADF ERVFLAGDSA GGNISHHMAM RAGKEKLKPR IKGTVIVHPA IWGKDPVDEH DVQDREIRDG VAEVWEKIVS PNSVDGADDP WFNVVGSGSN 301: FSGMGCDKVL VEVAGKDVFW RQGLAYAAKL KKSGWKGEVE VIEEEDEEHC FHLLNPSSEN APSFMKRFVE FITG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)