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AT1G49410.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:27943495 (2017): mitochondrion
  • PMID:22574745 (2012): mitochondrion
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21311031 (2011): mitochondrion
  • PMID:19334764 (2009): plasma membrane
  • PMID:15604729 (2004): mitochondrion
  • PMID:14730085 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : translocase of the outer mitochondrial membrane 6
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
translocase of the outer mitochondrial membrane 6 (TOM6); Has 30 Blast hits to 30 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:26590eggNOG:ENOG410J4E2eggNOG:ENOG410Y58XEMBL:AC007504
EMBL:AF324714EMBL:AF325059EMBL:AF327425EMBL:AF339720
EMBL:AY037189EMBL:BT002672EMBL:CP002684EnsemblPlants:AT1G49410
EnsemblPlants:AT1G49410.1entrez:841365GeneID:841365Genevisible:Q9XIA7
GO:GO:0005739GO:GO:0005741GO:GO:0015031GO:GO:0016021
Gramene:AT1G49410.1hmmpanther:PTHR35999HOGENOM:HOG000029114InParanoid:Q9XIA7
IntAct:Q9XIA7KEGG:ath:AT1G49410OMA:RTHVALFPaxDb:Q9XIA7
Pfam:Q9XIA7PhylomeDB:Q9XIA7PIR:E96530PRIDE:Q9XIA7
PRO:PR:Q9XIA7Proteomes:UP000006548RefSeq:NP_564545.1STRING:3702.AT1G49410.1
TAIR:AT1G49410tair10-symbols:TOM6TMHMM:TMhelixUniGene:At.23960
UniProt:Q9XIA7
Coordinates (TAIR10) chr1:-:18286738..18286902
Molecular Weight (calculated) 6265.73 Da
IEP (calculated) 9.77
GRAVY (calculated) 0.08
Length 54 amino acids
Sequence (TAIR10)
(BLAST)
1: MFPGMFMRKP DKAEALKQLR THVALFGSWV VIIRAAPYVL SYFSDSKDEL KIDF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)