AT1G49350.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : pfkB-like carbohydrate kinase family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
pfkB-like carbohydrate kinase family protein; FUNCTIONS IN: kinase activity, ribokinase activity; INVOLVED IN: D-ribose metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate/purine kinase (InterPro:IPR011611), Ribokinase (InterPro:IPR002139), Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); Has 2896 Blast hits to 2893 proteins in 1061 species: Archae - 1; Bacteria - 2475; Metazoa - 103; Fungi - 59; Plants - 64; Viruses - 0; Other Eukaryotes - 194 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:18265070..18267034 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40322.30 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.81 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.27 | ||||||||||||||||||||||||||||||||||||
| Length | 378 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEPVIIGALI LDVHAKPSTT PISGTTVPGQ VLFAPGGVAR NVADCIFKLG ITPFMIGTLG LDGPANVLLK EWKLSMKGIL RREDISTPIV SLVYDTNGEV 101: AAGVAGVDAV ENFLTPEWIQ RFEYNISSAR LLMVDANLSS LALEASCKLA AESSVPVWFE PVSVTKSQRI ASIAKYVTIV SPNQDELIAM ANALCAKNLF 201: HPFRSDENKL SIEDMFRALK PAILVLLKNG VKVVIVTLGS NGALLCSKGN PKKALNIDRK FLRSGEVFKR VQSVCSPNRF SELGSNRSPS LFAMHFPTIP 301: AKVKKLTGAG DCLVGGTVAS LSDGLDLIQS LAVGIASAKA AVESDDNVPP EFKLDLISGD AELVYNGAKM LMVHQSML |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)