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AT1G49245.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.962
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Prefoldin chaperone subunit family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Prefoldin chaperone subunit family protein; FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin beta-like (InterPro:IPR002777), Prefoldin (InterPro:IPR009053); Has 20 Blast hits to 20 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J2YSeggNOG:ENOG410Z2B5EMBL:AK227841EMBL:AY086151
EMBL:BT025018EMBL:CP002684EnsemblPlants:AT1G49245EnsemblPlants:AT1G49245.1
entrez:841348Gene3D:1.10.287.370GeneID:841348GO:GO:0006457
GO:GO:0016272Gramene:AT1G49245.1HOGENOM:HOG000029139InterPro:IPR002777
InterPro:IPR009053KEGG:ath:AT1G49245OMA:YQKAGNIPfam:PF01920
PhylomeDB:Q8LD83Proteomes:UP000006548RefSeq:NP_564542.1STRING:3702.AT1G49245.1
SUPFAM:SSF46579TAIR:AT1G49245UniGene:At.38267UniProt:Q8LD83
Coordinates (TAIR10) chr1:+:18218861..18219085
Molecular Weight (calculated) 8462.92 Da
IEP (calculated) 9.63
GRAVY (calculated) -0.85
Length 74 amino acids
Sequence (TAIR10)
(BLAST)
1: MATTTSSDRE FELEKEIKRQ EVSLDELSSL SSSRSIYQKN GNLFFLTSAE KAKISAQKQL DYAKSEINKI RSQK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)