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AT1G49180.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.946
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding, nucleic acid binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase, putative (InterPro:IPR020655), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G37840.1); Has 129968 Blast hits to 127865 proteins in 4383 species: Archae - 162; Bacteria - 14751; Metazoa - 47537; Fungi - 13056; Plants - 32291; Viruses - 546; Other Eukaryotes - 21625 (source: NCBI BLink).
Protein Annotations
EC:2.7.11.-eggNOG:ENOG410XR01eggNOG:KOG0595eggNOG:KOG0969EMBL:AC016041EMBL:AK228237EMBL:CP002684
EnsemblPlants:AT1G49180EnsemblPlants:AT1G49180.1entrez:841341ExpressionAtlas:F4I1N8GeneID:841341Genevisible:F4I1N8GO:GO:0003676
GO:GO:0004674GO:GO:0005524GO:GO:0005776GO:GO:0006914GO:GO:0015031GO:GO:0031410hmmpanther:PTHR24348
hmmpanther:PTHR24348:SF24InParanoid:F4I1N8InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009InterPro:IPR012337OMA:VWLAKHK
PaxDb:F4I1N8Pfam:PF00069Pfscan:PS50011PRIDE:F4I1N8PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:F4I1N8
Proteomes:UP000006548RefSeq:NP_175344.2scanprosite:PS00108SMART:SM00220SMR:F4I1N8STRING:3702.AT1G49180.1SUPFAM:SSF53098
SUPFAM:SSF56112TAIR:AT1G49180UniGene:At.38286UniProt:F4I1N8
Coordinates (TAIR10) chr1:-:18184840..18187444
Molecular Weight (calculated) 46842.80 Da
IEP (calculated) 8.26
GRAVY (calculated) -0.17
Length 408 amino acids
Sequence (TAIR10)
(BLAST)
001: MMMLDDYIAK SKLSESLTST VWLAKHKLTG EEAVMKCFDL SKLNRNLRDC LNNELEFLSS VDHPNIIRLL HVSQDDDFLV MVLEYCDGGT LSSYIQRYGR
101: VEEDIAKRFM KQIGAGLEII HDNHIIHRDL KPENILIDGS GDDLVLKIAD FSLARKLHPG KYLETVCGSP FYMAPEVLQF QRYNEKADMW SVGAILFELL
201: HGYPPFRGNN NVQVLRNIKS STALPFSRLI LQQMHPDCID VCSRLLSINP AATLGIEDFP FLGRIKNSRV WVKDTTFSSR QHGTRERKVA TINGRLQFDL
301: SQDAYLPQRL LENLMYIYNT IEMARVTGVP TSYLISRGES IKVLSQLLRK AKQKTWFFQM LRSWNLNKEL MKVQLYVGGF ISPTYSFTYS SITSNILINI
401: SNDIYSHC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)