suba logo
AT1G49170.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF167)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF167); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF167 (InterPro:IPR003746); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF167) (TAIR:AT5G63440.3); Has 579 Blast hits to 579 proteins in 252 species: Archae - 16; Bacteria - 317; Metazoa - 105; Fungi - 25; Plants - 60; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG41123AIeggNOG:KOG3276EMBL:AK176668EMBL:BT010491EMBL:CP002684EnsemblPlants:AT1G49170EnsemblPlants:AT1G49170.1
entrez:841340Gene3D:3.30.1200.10GeneID:841340GO:GO:0016301Gramene:AT1G49170.1HAMAP:MF_00634hmmpanther:PTHR13420
hmmpanther:PTHR13420:SF7HOGENOM:HOG000019209InterPro:IPR003746KEGG:ath:AT1G49170KO:K09131OMA:CIRAVPPPfam:PF02594
PhylomeDB:Q6NQG5Proteomes:UP000006548RefSeq:NP_175343.2SMART:SM01152SMR:Q6NQG5STRING:3702.AT1G49170.1SUPFAM:SSF69786
TAIR:AT1G49170UniGene:At.38289UniProt:Q6NQG5
Coordinates (TAIR10) chr1:-:18183561..18184434
Molecular Weight (calculated) 13124.60 Da
IEP (calculated) 10.03
GRAVY (calculated) -0.22
Length 126 amino acids
Sequence (TAIR10)
(BLAST)
001: MAPTKKGKKT KSAAESTTVT ESSSFPTCLR LLTPSSVAIT IHAKPGSKAA SITDVSDEAV GVQIDAPARD GEANAALLEY MSSVLGVKRR QVSLGSGSKS
101: RDKVVIVEDM TQQSVFQALS QASKPT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)