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AT1G49140.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Complex I subunit NDUFS6
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Complex I subunit NDUFS6; CONTAINS InterPro DOMAIN/s: NADH-ubiquinone oxidoreductase, subunit 10 (InterPro:IPR019377), Complex I subunit NDUFS6 (InterPro:IPR020163); BEST Arabidopsis thaliana protein match is: Complex I subunit NDUFS6 (TAIR:AT3G18410.2); Has 165 Blast hits to 165 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 92; Plants - 61; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G49140-MONOMERBioCyc:MetaCyc:AT1G49140-MONOMERBioGrid:26562eggNOG:ENOG4111MMM
eggNOG:KOG4009EMBL:AC016041EMBL:AK118515EMBL:AY084789
EMBL:BT004697EMBL:CP002684EnsemblPlants:AT1G49140EnsemblPlants:AT1G49140.1
entrez:841337GeneID:841337Genevisible:Q9M9B4GO:GO:0005739
GO:GO:0005747GO:GO:0009853GO:GO:0031966GO:GO:0045271
GO:GO:0055114Gramene:AT1G49140.1hmmpanther:PTHR13094hmmpanther:PTHR13094:SF1
HOGENOM:HOG000243605InParanoid:Q9M9B4IntAct:Q9M9B4InterPro:IPR020163
KEGG:ath:AT1G49140KO:K03966OMA:WIHIEKAPaxDb:Q9M9B4
Pfam:Q9M9B4PhylomeDB:Q9M9B4PRIDE:Q9M9B4PRO:PR:Q9M9B4
ProDom:PD069254Proteomes:UP000006548RefSeq:NP_564540.1STRING:3702.AT1G49140.1
TAIR:AT1G49140UniGene:At.25532UniGene:At.27837UniProt:Q9M9B4
Coordinates (TAIR10) chr1:-:18177696..18178269
Molecular Weight (calculated) 12531.10 Da
IEP (calculated) 8.25
GRAVY (calculated) -0.88
Length 107 amino acids
Sequence (TAIR10)
(BLAST)
001: MGRKKGLPEF EESAPDGFDP ENPYKDPVAM VEMREHIVRE KWIHIEKAKI LREKVKWCYR VEGVNHYQKC RHLVQQYLDA TRGVGWGKDH RPISLHGPKP
101: VAVEEAE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)