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AT1G48420.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : D-cysteine desulfhydrase
Curator
Summary (TAIR10)
Encodes an enzyme that decomposes D-cysteine into pyruvate, H2S, and NH3. Only D-cysteine but not L-cysteine was converted by D-CDes to pyruvate, H2S, and NH3. There is conflicting evidence on its 1-aminocyclopropane-1-carboxylate deaminase activity. Involved in regulating ethylene levels.
Computational
Description (TAIR10)
D-cysteine desulfhydrase (D-CDES); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate deaminase activity, D-cysteine desulfhydrase activity, cobalt ion binding, catalytic activity; INVOLVED IN: response to cadmium ion, ethylene biosynthetic process; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Pyridoxal phosphate-dependent deaminase (InterPro:IPR005966); BEST Arabidopsis thaliana protein match is: Pyridoxal-5'-phosphate-dependent enzyme family protein (TAIR:AT3G26115.1); Has 2814 Blast hits to 2813 proteins in 938 species: Archae - 31; Bacteria - 1992; Metazoa - 30; Fungi - 102; Plants - 101; Viruses - 0; Other Eukaryotes - 558 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G48420-MONOMERBioGrid:26488EC:3.5.99.7EC:4.4.1.15eggNOG:COG2515eggNOG:ENOG410IK6CEMBL:AC007932
EMBL:AC020889EMBL:AY062659EMBL:AY093325EMBL:CP002684EnsemblPlants:AT1G48420EnsemblPlants:AT1G48420.1entrez:841263
GeneID:841263Genevisible:F4HYF3GO:GO:0005739GO:GO:0005829GO:GO:0009507GO:GO:0009693GO:GO:0016787
GO:GO:0019148GO:GO:0019447GO:GO:0030170GO:GO:0046686GO:GO:0050897hmmpanther:PTHR10314hmmpanther:PTHR10314:SF79
HOGENOM:HOG000022459InParanoid:F4HYF3InterPro:IPR001926InterPro:IPR005966InterPro:IPR027278KEGG:ath:AT1G48420OMA:TLWDDYF
PaxDb:F4HYF3Pfam:F4HYF3Pfam:PF00291PIR:D96524PIRSF:PIRSF006278PRIDE:F4HYF3PRO:PR:F4HYF3
ProteinModelPortal:F4HYF3Proteomes:UP000006548RefSeq:NP_175275.3SMR:F4HYF3STRING:3702.AT1G48420.1SUPFAM:SSF53686TAIR:AT1G48420
tair10-symbols:ACD1tair10-symbols:ATACD1tair10-symbols:D-CDESTIGRfam:TIGR01275TIGRFAMs:TIGR01275UniGene:At.47257UniProt:F4HYF3
Coordinates (TAIR10) chr1:-:17896767..17898803
Molecular Weight (calculated) 43902.70 Da
IEP (calculated) 7.39
GRAVY (calculated) -0.21
Length 401 amino acids
Sequence (TAIR10)
(BLAST)
001: MRGRSLTLSR VKLELARRSM SATSVPSMAD FLTKKPYSPP SWASHLRPLP SHTFSLAHLP TPIHRWNLPG LPNGTELWIK RDDFTGMELS GNKVRKLEFL
101: MAEAVDQHAD TVITIGGIQS NHCRATATAS NYLNLNSHLI LRTSKLLADE DPGLVGNLLV ERLVGANVHL ISKEEYSSIG SEALTNALKE KLEKEGKKPY
201: VIPVGGSNSL GTWGYIEAAR EIEEQLNYRP DDLKFDDIVV ACGSGGTIAG ISLGSWLGAL KAKVHAFSVC DDPDYFYDFV QGLLDGLHAG VNSRDIVNIH
301: NAKGKGYAMN TSEELEFVKK VASSTGVILD PVYSGKAAYG LINEITKDPK CWEGRKILFI HTGGLLGLYD KVDQMASLMG NWSRMDVSES VPRKDGVGKM
401: F
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)