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AT1G48330.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17580.1); Has 40 Blast hits to 40 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J2SUeggNOG:ENOG410Z278EMBL:AC007932EMBL:BT010781EMBL:BT011259EMBL:CP002684EnsemblPlants:AT1G48330
EnsemblPlants:AT1G48330.1entrez:841253GeneID:841253Gramene:AT1G48330.1hmmpanther:PTHR33181hmmpanther:PTHR33181:SF10HOGENOM:HOG000237785
KEGG:ath:AT1G48330OMA:QVEVMACPhylomeDB:Q9SX67PIR:D96523Proteomes:UP000006548RefSeq:NP_175267.1TAIR:AT1G48330
UniGene:At.38440UniProt:Q9SX67
Coordinates (TAIR10) chr1:+:17863897..17864124
Molecular Weight (calculated) 8516.00 Da
IEP (calculated) 9.27
GRAVY (calculated) -0.77
Length 75 amino acids
Sequence (TAIR10)
(BLAST)
1: MASWKKTIAT PFKKAATFFN QPQQTNRHAN AKAREEHEKR TVQELQGDVM ACGYEDVLVM WSILDKSNSS NNLSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)