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AT1G48325.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Expressed protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Expressed protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
EMBL:AK228342EMBL:BT003100EMBL:CP002684EnsemblPlants:AT1G48325
EnsemblPlants:AT1G48325.1entrez:2745817GeneID:2745817Gramene:AT1G48325.1
hmmpanther:PTHR33511hmmpanther:PTHR33511:SF3HOGENOM:HOG000239192KEGG:ath:AT1G48325
OMA:INVRPRIPhylomeDB:Q84WL4Proteomes:UP000006548RefSeq:NP_973989.1
TAIR:AT1G48325UniGene:At.47682UniProt:Q84WL4
Coordinates (TAIR10) chr1:+:17857326..17857574
Molecular Weight (calculated) 9466.24 Da
IEP (calculated) 8.96
GRAVY (calculated) -0.81
Length 82 amino acids
Sequence (TAIR10)
(BLAST)
1: MKMGGHGRRR KSSSSFSVVK SLFARCSKEK DNWNEERMIN VRPRIMTTDD DGCSWTIAEP CIDRRATAFI AKFHETPIQD TE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)