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AT1G48140.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.939
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : dolichol-phosphate mannosyltransferase-related
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
dolichol-phosphate mannosyltransferase-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichol-phosphate mannosyltransferase subunit 3 (InterPro:IPR013174); Has 82 Blast hits to 81 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 30; Fungi - 13; Plants - 38; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G48140-MONOMERBioCyc:MetaCyc:AT1G48140-MONOMEReggNOG:ENOG410J0PYeggNOG:ENOG4112CNDEMBL:AK118069EMBL:AY085296EMBL:BT005626
EMBL:CP002684EnsemblPlants:AT1G48140EnsemblPlants:AT1G48140.1entrez:841232ExpressionAtlas:Q8LEQ4GeneID:841232GO:GO:0005783
GO:GO:0005789GO:GO:0006506GO:GO:0016021GO:GO:0033185GO:GO:0035269Gramene:AT1G48140.1hmmpanther:PTHR16433
hmmpanther:PTHR16433:SF0HOGENOM:HOG000038272IntAct:Q8LEQ4InterPro:IPR013174OMA:PRSHTWLPfam:PF08285PhylomeDB:Q8LEQ4
Proteomes:UP000006548RefSeq:NP_564521.1STRING:3702.AT1G48140.1TAIR:AT1G48140TMHMM:TMhelixUniGene:At.38475UniProt:Q8LEQ4
Coordinates (TAIR10) chr1:+:17783402..17783914
Molecular Weight (calculated) 9811.42 Da
IEP (calculated) 8.76
GRAVY (calculated) 0.78
Length 89 amino acids
Sequence (TAIR10)
(BLAST)
1: MKHIVKILSL LVAISAFWIG LLQAAIIPRS HTWLLPIYFV VSLGCYGLLM VGVGLMQFPT CPQEAVLLQK DIAEAKDFFK HKGVDVGSN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)