AT1G47485.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes CEP1, a 15-amino-acid peptide, which is mainly expressed in the lateral root primordia. When overexpressed or externally applied, CEP1 arrests root growth. CEP1 is a candidate for a novel peptide plant hormone. | ||||||||||||||||||||||||
| Computational Description (TAIR10) |
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: root development, lateral root development; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apical meristem, inflorescence meristem, flower, lateral root primordium; EXPRESSED DURING: petal differentiation and expansion stage; Has 10 Blast hits to 10 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:17422564..17422839 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 10081.00 Da | ||||||||||||||||||||||||
| IEP (calculated) | 9.09 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||
| Length | 91 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
1: MGMSNRSVST SIFFLALVVL HGIQDTEERH LKTTSLEIEG IYKKTEAEHP SIVVTYTRRG VLQKEVIAHP TDFRPTNPGN SPGVGHSNGR H | ||||||||||||||||||||||||
| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)